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The map label for this gene is lptE [H]

Identifier: 218708738

GI number: 218708738

Start: 751740

End: 752396

Strand: Reverse

Name: lptE [H]

Synonym: VS_0717

Alternate gene names: 218708738

Gene position: 752396-751740 (Counterclockwise)

Preceding gene: 218708739

Following gene: 218708737

Centisome position: 22.8

GC content: 45.05

Gene sequence:

>657_bases
ATGCGCCTGAATTCACTATCTTCATTGAAAGTTACTATTGTTGTTCTAACCGTTAGCCTGCTGAGCGCCTGTGGTTTCCA
TTTACGTGGTGACTACTCCGTGCCACAAGAGCTCAACAAGATCTCAGTAACCAGTTACGACCAATACAGTACGTTTACAC
GTATGATGAAAAGCCAGCTACGTATGAATGATGTAGAAATAGTGCCACCAGCTGAAAATATCCCTAACCTACATATTCTT
GGTGAAGGAGTGGGGGAACGTACTTTGTCGCTATACCAAAATACTCGTGCCGCTGAGAAAGAGCTGACGCTTAACGCTTC
ATACCGCGTAACGATCCCAGAATTAGGAGCCAATACCTTCTCAACTAGCGTAACCCGAAGCTATTTAGACAACCCACTAA
CGGCACTCGCAAAATCGGTTGAGCGTGACATGATTGAAGACGAAATGCGCAAGCTTGCAACAAGCCAAATCCTTCGTCAA
ATGGCCCGACTGAAAGCGACTATTGCCGCAGGAAATATGAACCTAGAAGAGCTTGAACAGGTTCAAGTAAAAGAGCTAGA
AAAACAGTACAACATCAAAAACATCGAAATTGACGATGTTGAGGTCGACGCAAGTGCAGTACCTGATGCTGAGCCTAGCG
TAACTGTCGAGCAATAG

Upstream 100 bases:

>100_bases
GCCCTGTCTACTTATTTAAGCGCTTTAGACTTGAGCATAACAACTCAAACGAGCTAAAGCCTTTAAATAAGTATTCTACC
TTCATGAGAGCCATCAAATA

Downstream 100 bases:

>100_bases
GTTTATTTAATGCGTATTTTTGCTGATCGTTTATCTGAGCAACTTGCTAAGCAGTTAAGTAACGTTTACCTAATTTTTGG
TAACGAACCTTTACTGCTGC

Product: rare lipoprotein B precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRLNSLSSLKVTIVVLTVSLLSACGFHLRGDYSVPQELNKISVTSYDQYSTFTRMMKSQLRMNDVEIVPPAENIPNLHIL
GEGVGERTLSLYQNTRAAEKELTLNASYRVTIPELGANTFSTSVTRSYLDNPLTALAKSVERDMIEDEMRKLATSQILRQ
MARLKATIAAGNMNLEELEQVQVKELEKQYNIKNIEIDDVEVDASAVPDAEPSVTVEQ

Sequences:

>Translated_218_residues
MRLNSLSSLKVTIVVLTVSLLSACGFHLRGDYSVPQELNKISVTSYDQYSTFTRMMKSQLRMNDVEIVPPAENIPNLHIL
GEGVGERTLSLYQNTRAAEKELTLNASYRVTIPELGANTFSTSVTRSYLDNPLTALAKSVERDMIEDEMRKLATSQILRQ
MARLKATIAAGNMNLEELEQVQVKELEKQYNIKNIEIDDVEVDASAVPDAEPSVTVEQ
>Mature_218_residues
MRLNSLSSLKVTIVVLTVSLLSACGFHLRGDYSVPQELNKISVTSYDQYSTFTRMMKSQLRMNDVEIVPPAENIPNLHIL
GEGVGERTLSLYQNTRAAEKELTLNASYRVTIPELGANTFSTSVTRSYLDNPLTALAKSVERDMIEDEMRKLATSQILRQ
MARLKATIAAGNMNLEELEQVQVKELEKQYNIKNIEIDDVEVDASAVPDAEPSVTVEQ

Specific function: Together with lptD, is involved in the assembly of LPS in the outer leaflet of the outer membrane [H]

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptE lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786860, Length=161, Percent_Identity=31.055900621118, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007485 [H]

Pfam domain/function: PF04390 RplB [H]

EC number: NA

Molecular weight: Translated: 24339; Mature: 24339

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNSLSSLKVTIVVLTVSLLSACGFHLRGDYSVPQELNKISVTSYDQYSTFTRMMKSQL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHHH
RMNDVEIVPPAENIPNLHILGEGVGERTLSLYQNTRAAEKELTLNASYRVTIPELGANTF
CCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCHH
STSVTRSYLDNPLTALAKSVERDMIEDEMRKLATSQILRQMARLKATIAAGNMNLEELEQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VQVKELEKQYNIKNIEIDDVEVDASAVPDAEPSVTVEQ
HHHHHHHHHCCCCCCEECCEEECCCCCCCCCCCCEECC
>Mature Secondary Structure
MRLNSLSSLKVTIVVLTVSLLSACGFHLRGDYSVPQELNKISVTSYDQYSTFTRMMKSQL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHHH
RMNDVEIVPPAENIPNLHILGEGVGERTLSLYQNTRAAEKELTLNASYRVTIPELGANTF
CCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCHH
STSVTRSYLDNPLTALAKSVERDMIEDEMRKLATSQILRQMARLKATIAAGNMNLEELEQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VQVKELEKQYNIKNIEIDDVEVDASAVPDAEPSVTVEQ
HHHHHHHHHCCCCCCEECCEEECCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]