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The map label for this gene is 218708394

Identifier: 218708394

GI number: 218708394

Start: 355043

End: 357667

Strand: Reverse

Name: 218708394

Synonym: VS_0354

Alternate gene names: NA

Gene position: 357667-355043 (Counterclockwise)

Preceding gene: 218708395

Following gene: 218708393

Centisome position: 10.84

GC content: 47.01

Gene sequence:

>2625_bases
TTGTTCGTAACAAAAGGCAGACCATCAATAATAAGGATAAAGTACATGACGCAGACAACATCACCGTCTCCAGATGTGCA
AGAAATGGTGGCACAATCAGATACTGGTGCGCGTAGCCCTCGTGGTATCCAAGGCCGTATTTTATGGTTTGTGCCTCTAT
GTTGGTCACTGTTCCAACTTTGGTATGCATCTCCGCTGCCATTCATTTTTAACTTCGCAATTTTAAACGACACTGAAGCT
CGAGCAATTCACCTTACGTTTGCTATTTTCCTAGCCTTTACCGCTTATCCAGCCATGAAGAATTCGCCTAGGGATCGCAT
CCCAGCCGTCGACTGGATATTAGCGCTTGTAGGTAGCTTTTCAGCTTCTTATATCTATATTTTCTATACTCAACTCGCTG
AACGTTCAGGCGCTCCAACAACGTTTGATATTGTTGCAGCGGTATTCGGTATGGTTCTACTGCTTGAAGCAACACGACGC
GCTTTAGGTCCACCTCTTATGGTTGTGGCAGCAGTCTTCCTACTTTACACCTTTGGCGGTCCACACATGCCAGACGTTAT
CGCCCACAAAGGTGCGAGCCTGAACAAGGCAATGTCGCATCTGTGGTTAACAACAGAAGGTGTGTTCGGTGTTGCTCTTG
GCGTATCAACGTCATTCGTATTCTTGTTTGTACTGTTTGGTGCAATGCTTGAGCGCGCGGGTGCAGGTGCTTACTTCATC
AAAGTGGCATTCTCTCTGCTTGGCCACATGAAGGGCGGCCCAGCGAAAGCAGCCGTTGTAGCATCTGGTTTATCTGGTCT
GGTATCAGGTTCTTCGATTGCTAACGTAGTTACCACAGGTACCTTTACTATCCCGCTAATGAAGCGTGTTGGTTTCCCGG
GAACAAAAGCGGGTGCGGTAGAAGTCGCAGCTTCAACCAATGGTCAATTAACACCACCGATCATGGGTGCAGCAGCATTC
TTGATGGTTGAGTACGTGGGCATCTCTTACGTAGAAGTAATCAAAGCAGCACTACTGCCCGCTCTGATCTCTTACATCGC
CCTGATTTACATTGTTCACTTAGAGGCATGTAAAGCAGGTATGACGGGCTTACCTCGTCGTCACACACCAACTATCGTGC
AAAGCCTACTCTCTTTCACTGGTACTATCTTAGGCCTATGTGTCATCAGTGCAGCGGTTTACTACGGTGTCGGCTGGACA
AAAGATGTCTTTGGCGCTGCAGCCACACCAATTGTGACTGTTGCTCTATTAGTCTCTTATGTCGCTCTGGTTCGTGTTTC
TGCTAAATACGCAGCTGAAGGTGGCATGGAAATCGACGAGAACCTAACAGAAGTACCTGATCCAGGCCCAACGATTAAGT
CTGGCCTTCACTTCCTACTGCCTATCGTAGTTCTAGTTTGGTGTTTAACGGTTGAACGTTTCTCTCCAGGTCTGTCGGCA
TTCTGGGCGACTGTGTTCATGATCTTCATTCTGATCACTCAGCGTCCTTTGATGACTCTGATGAACAAATCAGACGATCT
TGCAGAGCAAACTAAAGCAGGTTTCGTTGACCTAGCAGAGAGCTTAGTTTCAGGCGCACGTAACATGATCGGTATCGGTG
TAGCGACAGCTGCAGCAGGTACGGTTGTAGGCGTGGTAACACTGACAGGTATCGGCCTTGTAATGACCGATTTTGTTGAG
TTCATCTCAGGCGGTAGCATCATTCTAATGTTGTTATTCACTGCGGTAATCAGCTTGATCTTAGGTATGGGCTTGCCAAC
AACGGCGAACTACATCGTTGTATCAACATTGATGGCACCAGTAATTGTTACCTTAGGTGCAGCGCACGGCTTGATCATTC
CACTGATTGCGGTTCACTTATTCGTGTTCTACTTCGGTATTCTTGCGGACGATACACCTCCGGTAGGTTTGGCTGCATTT
GCGGCCGCTGCGATTGCTAAATCAGACCCGATTCGTACCGGTATTCAAGGTTTTACCTACGATATCCGGACCGCGATATT
GCCGTTCATGTTCATCTTCAACACCCAACTACTGTTGATGGGCATTGATTCTTGGTGGCACTTAGCACTGACGATTTTCT
CTTCGGTTACTGCGGTACTTATCTTTGCAGCAGCGACACAAGGTTGGTGGTTCACTAAGAACAAGTGGTGGGAAACTATA
CTGCTTATCGTTCTGACCTTCTCTTTCTTCCGCCCTGGCTTCTGGTGGGACATGATTTATCCAGAGAAAGTTCTTTCACC
TGGAGTTGAGATCGCTCAAATCACAGAAAATCTATCTGTGGGACAATCACTTGAATTGAGAGTCGGTGGCGAAAACTTAG
AAGGTAACTATTCTGAGAAAACAGTTCGCCTTCCGTTTGAAGATTCTGCGACAACAAGTGAAGACCGCATTGCTTCAATG
GGCCTAATGCTGACCCAAGCTGACGACAAGATGATTGTTGATATGGTTGAGTTTGGTAGCCCTGCTGAAGCCGCTGGCAT
TGACTTTGATTGGGAAATTAAATCCGTTATCCAAGATGCAGAACGACCAATGAAAGAGTGGGTATTCTTACCTGCCCTAC
TGATTTTGATTGGTTTAGCGATGAACCAAAGAAGGCGTGCTCGTAAGGATGAGATTAGCGCGTAA

Upstream 100 bases:

>100_bases
TTGGAGGACTTACCTTCGTATCAAGCCTAAGACAAAGACGAACAAAGAACGCATTTCTCTATCCATTCACTACACTAGAT
AGGAAAGAAATCACGTTTAG

Downstream 100 bases:

>100_bases
TGGATAGAGCCAAATAGCGCTCTACTCTATTTGGCTTTTTTACTACATGGAAAAGATAATTACAGCGCTTGGTATGTACT
CGGCGCTGCTCAAAAAGAGA

Product: TRAP-type transport system permease

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Inner Membrane Protein; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transporter; 4TM/12TM TRAP Transporter; TRAP Transporter Membrane-Spanning Component; TRAP-Type Transport System

Number of amino acids: Translated: 874; Mature: 874

Protein sequence:

>874_residues
MFVTKGRPSIIRIKYMTQTTSPSPDVQEMVAQSDTGARSPRGIQGRILWFVPLCWSLFQLWYASPLPFIFNFAILNDTEA
RAIHLTFAIFLAFTAYPAMKNSPRDRIPAVDWILALVGSFSASYIYIFYTQLAERSGAPTTFDIVAAVFGMVLLLEATRR
ALGPPLMVVAAVFLLYTFGGPHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFI
KVAFSLLGHMKGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAF
LMVEYVGISYVEVIKAALLPALISYIALIYIVHLEACKAGMTGLPRRHTPTIVQSLLSFTGTILGLCVISAAVYYGVGWT
KDVFGAAATPIVTVALLVSYVALVRVSAKYAAEGGMEIDENLTEVPDPGPTIKSGLHFLLPIVVLVWCLTVERFSPGLSA
FWATVFMIFILITQRPLMTLMNKSDDLAEQTKAGFVDLAESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVE
FISGGSIILMLLFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAAHGLIIPLIAVHLFVFYFGILADDTPPVGLAAF
AAAAIAKSDPIRTGIQGFTYDIRTAILPFMFIFNTQLLLMGIDSWWHLALTIFSSVTAVLIFAAATQGWWFTKNKWWETI
LLIVLTFSFFRPGFWWDMIYPEKVLSPGVEIAQITENLSVGQSLELRVGGENLEGNYSEKTVRLPFEDSATTSEDRIASM
GLMLTQADDKMIVDMVEFGSPAEAAGIDFDWEIKSVIQDAERPMKEWVFLPALLILIGLAMNQRRRARKDEISA

Sequences:

>Translated_874_residues
MFVTKGRPSIIRIKYMTQTTSPSPDVQEMVAQSDTGARSPRGIQGRILWFVPLCWSLFQLWYASPLPFIFNFAILNDTEA
RAIHLTFAIFLAFTAYPAMKNSPRDRIPAVDWILALVGSFSASYIYIFYTQLAERSGAPTTFDIVAAVFGMVLLLEATRR
ALGPPLMVVAAVFLLYTFGGPHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFI
KVAFSLLGHMKGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAF
LMVEYVGISYVEVIKAALLPALISYIALIYIVHLEACKAGMTGLPRRHTPTIVQSLLSFTGTILGLCVISAAVYYGVGWT
KDVFGAAATPIVTVALLVSYVALVRVSAKYAAEGGMEIDENLTEVPDPGPTIKSGLHFLLPIVVLVWCLTVERFSPGLSA
FWATVFMIFILITQRPLMTLMNKSDDLAEQTKAGFVDLAESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVE
FISGGSIILMLLFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAAHGLIIPLIAVHLFVFYFGILADDTPPVGLAAF
AAAAIAKSDPIRTGIQGFTYDIRTAILPFMFIFNTQLLLMGIDSWWHLALTIFSSVTAVLIFAAATQGWWFTKNKWWETI
LLIVLTFSFFRPGFWWDMIYPEKVLSPGVEIAQITENLSVGQSLELRVGGENLEGNYSEKTVRLPFEDSATTSEDRIASM
GLMLTQADDKMIVDMVEFGSPAEAAGIDFDWEIKSVIQDAERPMKEWVFLPALLILIGLAMNQRRRARKDEISA
>Mature_874_residues
MFVTKGRPSIIRIKYMTQTTSPSPDVQEMVAQSDTGARSPRGIQGRILWFVPLCWSLFQLWYASPLPFIFNFAILNDTEA
RAIHLTFAIFLAFTAYPAMKNSPRDRIPAVDWILALVGSFSASYIYIFYTQLAERSGAPTTFDIVAAVFGMVLLLEATRR
ALGPPLMVVAAVFLLYTFGGPHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFI
KVAFSLLGHMKGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAVEVAASTNGQLTPPIMGAAAF
LMVEYVGISYVEVIKAALLPALISYIALIYIVHLEACKAGMTGLPRRHTPTIVQSLLSFTGTILGLCVISAAVYYGVGWT
KDVFGAAATPIVTVALLVSYVALVRVSAKYAAEGGMEIDENLTEVPDPGPTIKSGLHFLLPIVVLVWCLTVERFSPGLSA
FWATVFMIFILITQRPLMTLMNKSDDLAEQTKAGFVDLAESLVSGARNMIGIGVATAAAGTVVGVVTLTGIGLVMTDFVE
FISGGSIILMLLFTAVISLILGMGLPTTANYIVVSTLMAPVIVTLGAAHGLIIPLIAVHLFVFYFGILADDTPPVGLAAF
AAAAIAKSDPIRTGIQGFTYDIRTAILPFMFIFNTQLLLMGIDSWWHLALTIFSSVTAVLIFAAATQGWWFTKNKWWETI
LLIVLTFSFFRPGFWWDMIYPEKVLSPGVEIAQITENLSVGQSLELRVGGENLEGNYSEKTVRLPFEDSATTSEDRIASM
GLMLTQADDKMIVDMVEFGSPAEAAGIDFDWEIKSVIQDAERPMKEWVFLPALLILIGLAMNQRRRARKDEISA

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94268; Mature: 94268

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTKGRPSIIRIKYMTQTTSPSPDVQEMVAQSDTGARSPRGIQGRILWFVPLCWSLFQL
CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
WYASPLPFIFNFAILNDTEARAIHLTFAIFLAFTAYPAMKNSPRDRIPAVDWILALVGSF
HHCCCCHHHHEEHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
SASYIYIFYTQLAERSGAPTTFDIVAAVFGMVLLLEATRRALGPPLMVVAAVFLLYTFGG
CCCEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFI
CCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KVAFSLLGHMKGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAV
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCE
EVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAALLPALISYIALIYIVHLEACKAG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MTGLPRRHTPTIVQSLLSFTGTILGLCVISAAVYYGVGWTKDVFGAAATPIVTVALLVSY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VALVRVSAKYAAEGGMEIDENLTEVPDPGPTIKSGLHFLLPIVVLVWCLTVERFSPGLSA
HHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
FWATVFMIFILITQRPLMTLMNKSDDLAEQTKAGFVDLAESLVSGARNMIGIGVATAAAG
HHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TVVGVVTLTGIGLVMTDFVEFISGGSIILMLLFTAVISLILGMGLPTTANYIVVSTLMAP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VIVTLGAAHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQGFTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCHH
DIRTAILPFMFIFNTQLLLMGIDSWWHLALTIFSSVTAVLIFAAATQGWWFTKNKWWETI
HHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHH
LLIVLTFSFFRPGFWWDMIYPEKVLSPGVEIAQITENLSVGQSLELRVGGENLEGNYSEK
HHHHHHHHHHCCCCEEECCCCHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
TVRLPFEDSATTSEDRIASMGLMLTQADDKMIVDMVEFGSPAEAAGIDFDWEIKSVIQDA
EEECCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
ERPMKEWVFLPALLILIGLAMNQRRRARKDEISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFVTKGRPSIIRIKYMTQTTSPSPDVQEMVAQSDTGARSPRGIQGRILWFVPLCWSLFQL
CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
WYASPLPFIFNFAILNDTEARAIHLTFAIFLAFTAYPAMKNSPRDRIPAVDWILALVGSF
HHCCCCHHHHEEHEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC
SASYIYIFYTQLAERSGAPTTFDIVAAVFGMVLLLEATRRALGPPLMVVAAVFLLYTFGG
CCCEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLERAGAGAYFI
CCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KVAFSLLGHMKGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFPGTKAGAV
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCE
EVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAALLPALISYIALIYIVHLEACKAG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MTGLPRRHTPTIVQSLLSFTGTILGLCVISAAVYYGVGWTKDVFGAAATPIVTVALLVSY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VALVRVSAKYAAEGGMEIDENLTEVPDPGPTIKSGLHFLLPIVVLVWCLTVERFSPGLSA
HHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
FWATVFMIFILITQRPLMTLMNKSDDLAEQTKAGFVDLAESLVSGARNMIGIGVATAAAG
HHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TVVGVVTLTGIGLVMTDFVEFISGGSIILMLLFTAVISLILGMGLPTTANYIVVSTLMAP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VIVTLGAAHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDPIRTGIQGFTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCHH
DIRTAILPFMFIFNTQLLLMGIDSWWHLALTIFSSVTAVLIFAAATQGWWFTKNKWWETI
HHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHH
LLIVLTFSFFRPGFWWDMIYPEKVLSPGVEIAQITENLSVGQSLELRVGGENLEGNYSEK
HHHHHHHHHHCCCCEEECCCCHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
TVRLPFEDSATTSEDRIASMGLMLTQADDKMIVDMVEFGSPAEAAGIDFDWEIKSVIQDA
EEECCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
ERPMKEWVFLPALLILIGLAMNQRRRARKDEISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA