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The map label for this gene is uspF [H]

Identifier: 218708393

GI number: 218708393

Start: 354498

End: 354974

Strand: Reverse

Name: uspF [H]

Synonym: VS_0353

Alternate gene names: 218708393

Gene position: 354974-354498 (Counterclockwise)

Preceding gene: 218708394

Following gene: 218708389

Centisome position: 10.76

GC content: 43.61

Gene sequence:

>477_bases
TTGGTATGTACTCGGCGCTGCTCAAAAAGAGACGAATACATGTATAGACAAATCCTTGTTCCCGTTGATCTGAACGACAA
AGGCTTTTCTGATAAAGCGGTCGAGCTAGCGGTATGGCACGCGAAACACAGTAATGCTGAGATCCACATTCTGAACGTAT
TACCGGGCATCCACATGTCGATGGTAGCGTCTTACTTCCCGAAAGATGCAGCAAACCAAATGAAGCTTGATGTTAAAAAT
CAGCTGAAAGAATTTGCTGATAAGCATATCGACGATGATGTGATCTATAAAGTTCACGTTGCCGAAGGCAAGACCTACAC
AACGATTCTTGATTGCGCAGAGAAACTAGGGGCAGATCTTATCGTGATGCCTAGTCATAAGCGTTCAAAAATCGACAAGG
TTGTACTTGGTTCTGTTGCAAGCAAAGTGGTTCAGAACTCACCAATCAATGTATTGGTAGTTAAGCCGCAAGGCTAA

Upstream 100 bases:

>100_bases
GGCGTGCTCGTAAGGATGAGATTAGCGCGTAATGGATAGAGCCAAATAGCGCTCTACTCTATTTGGCTTTTTTACTACAT
GGAAAAGATAATTACAGCGC

Downstream 100 bases:

>100_bases
ATCACTTAATCGACACAACGATCTAAATCTAAAAAGGTTGGCCTAAAAGCCAACCTTTTTTTATTTTGTGCTTGCACCAT
TAAATACTTCTAATCAAATC

Product: universal stress protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MVCTRRCSKRDEYMYRQILVPVDLNDKGFSDKAVELAVWHAKHSNAEIHILNVLPGIHMSMVASYFPKDAANQMKLDVKN
QLKEFADKHIDDDVIYKVHVAEGKTYTTILDCAEKLGADLIVMPSHKRSKIDKVVLGSVASKVVQNSPINVLVVKPQG

Sequences:

>Translated_158_residues
MVCTRRCSKRDEYMYRQILVPVDLNDKGFSDKAVELAVWHAKHSNAEIHILNVLPGIHMSMVASYFPKDAANQMKLDVKN
QLKEFADKHIDDDVIYKVHVAEGKTYTTILDCAEKLGADLIVMPSHKRSKIDKVVLGSVASKVVQNSPINVLVVKPQG
>Mature_158_residues
MVCTRRCSKRDEYMYRQILVPVDLNDKGFSDKAVELAVWHAKHSNAEIHILNVLPGIHMSMVASYFPKDAANQMKLDVKN
QLKEFADKHIDDDVIYKVHVAEGKTYTTILDCAEKLGADLIVMPSHKRSKIDKVVLGSVASKVVQNSPINVLVVKPQG

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=146, Percent_Identity=34.9315068493151, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786824, Length=145, Percent_Identity=33.1034482758621, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 17714; Mature: 17714

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCTRRCSKRDEYMYRQILVPVDLNDKGFSDKAVELAVWHAKHSNAEIHILNVLPGIHMS
CCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHH
MVASYFPKDAANQMKLDVKNQLKEFADKHIDDDVIYKVHVAEGKTYTTILDCAEKLGADL
HHHHHCCCCCCHHEEECHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCE
IVMPSHKRSKIDKVVLGSVASKVVQNSPINVLVVKPQG
EEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MVCTRRCSKRDEYMYRQILVPVDLNDKGFSDKAVELAVWHAKHSNAEIHILNVLPGIHMS
CCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHH
MVASYFPKDAANQMKLDVKNQLKEFADKHIDDDVIYKVHVAEGKTYTTILDCAEKLGADL
HHHHHCCCCCCHHEEECHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCE
IVMPSHKRSKIDKVVLGSVASKVVQNSPINVLVVKPQG
EEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]