| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is zur [H]
Identifier: 218708343
GI number: 218708343
Start: 284664
End: 285119
Strand: Reverse
Name: zur [H]
Synonym: VS_0290
Alternate gene names: 218708343
Gene position: 285119-284664 (Counterclockwise)
Preceding gene: 218708345
Following gene: 218708342
Centisome position: 8.64
GC content: 42.98
Gene sequence:
>456_bases GTGAAAAATTTGGACCACACATTAATAGAGCAAGTTGAAGGGATATGCGTATCGCGAGGTGTTAGGCTAACACCCCAAAG AAAGCGAGTGTTTGAGCTTATCCTATCTAATAAAAAAGCCTCCAGTGCTTATGAATTATTAGAGCAATTGAAAGTCAGTG AACCGCAAGCCAAGCCTCCTACAGTTTATCGCGCTTTGGATTTTTTGTTAGAGCAAGGGTTCATTCACCGAGTTGAGTCA ACGAATAGCTTTATATGCTGCTGCTCTTGCAATGCCAACACGCATTTTTCCCAATTACTGATCTGCGATAAATGTGGCAC TGTGATAGAATTACAAGACGATGCGCTTGTCGCCCTACTCGCGAGTAACGCCGAGCAGCATGGATTCAAGTTGACCAACC ATGTCATTGAATCACATGGCATTTGCCAAACTTGCTCCTCCGAAATGAAAGAATAA
Upstream 100 bases:
>100_bases TAGGTCACAATACGCTCTGTACCTGACTTTAATAAAATCAATGTCTCCTCAAACAAGGTTACCTAGCAATAGGGGCTGAA TGGGGATGTTTGATTGAACG
Downstream 100 bases:
>100_bases GATTATAGAAGAACATTATGCGCGCTGAATTTGTAAACCCGTTTTTAGCTTCTTTGATGAACGTACTAAAAACGATGGCA TCTCTAGAATTAAAGCCTCA
Product: putative zinc uptake regulation protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKNLDHTLIEQVEGICVSRGVRLTPQRKRVFELILSNKKASSAYELLEQLKVSEPQAKPPTVYRALDFLLEQGFIHRVES TNSFICCCSCNANTHFSQLLICDKCGTVIELQDDALVALLASNAEQHGFKLTNHVIESHGICQTCSSEMKE
Sequences:
>Translated_151_residues MKNLDHTLIEQVEGICVSRGVRLTPQRKRVFELILSNKKASSAYELLEQLKVSEPQAKPPTVYRALDFLLEQGFIHRVES TNSFICCCSCNANTHFSQLLICDKCGTVIELQDDALVALLASNAEQHGFKLTNHVIESHGICQTCSSEMKE >Mature_151_residues MKNLDHTLIEQVEGICVSRGVRLTPQRKRVFELILSNKKASSAYELLEQLKVSEPQAKPPTVYRALDFLLEQGFIHRVES TNSFICCCSCNANTHFSQLLICDKCGTVIELQDDALVALLASNAEQHGFKLTNHVIESHGICQTCSSEMKE
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=144, Percent_Identity=50.6944444444444, Blast_Score=149, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16896; Mature: 16896
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLDHTLIEQVEGICVSRGVRLTPQRKRVFELILSNKKASSAYELLEQLKVSEPQAKPP CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC TVYRALDFLLEQGFIHRVESTNSFICCCSCNANTHFSQLLICDKCGTVIELQDDALVALL HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEEECCCCCEEEECCCHHHHHH ASNAEQHGFKLTNHVIESHGICQTCSSEMKE HCCCHHHCHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MKNLDHTLIEQVEGICVSRGVRLTPQRKRVFELILSNKKASSAYELLEQLKVSEPQAKPP CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC TVYRALDFLLEQGFIHRVESTNSFICCCSCNANTHFSQLLICDKCGTVIELQDDALVALL HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEEECCCCCEEEECCCHHHHHH ASNAEQHGFKLTNHVIESHGICQTCSSEMKE HCCCHHHCHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]