| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708342
Identifier: 218708342
GI number: 218708342
Start: 284185
End: 284646
Strand: Reverse
Name: 218708342
Synonym: VS_0289
Alternate gene names: NA
Gene position: 284646-284185 (Counterclockwise)
Preceding gene: 218708343
Following gene: 218708340
Centisome position: 8.63
GC content: 45.02
Gene sequence:
>462_bases ATGCGCGCTGAATTTGTAAACCCGTTTTTAGCTTCTTTGATGAACGTACTAAAAACGATGGCATCTCTAGAATTAAAGCC TCAGAAACCAAGAGTGAAGAAAGATGAAATCGCTCGTGGTGATGTGTCCGGCCTAATTGGTATGGTTGGTACACAGTCTC GTGGCTCAATGTCGATCACCTTTGATGAAGGGCTTGCTCTAGAAATCATGGAAAACATGCTAGGTGAACGACCAAACGGT TTGAACGAAGAAGTGACCGACATGGTGGGTGAAATCACTAACATGGTAACCGGTGGCGCAAAGCGTATTCTTGCAGAAAG CGGCTTTGACTTCGATATGGCAACGCCAATCGTGGTTTCAGGTAAAGGCCATACTATTCGTCACAAGTGTGAAGGCGCAA TCATCATCATGCCTTTCTCATCTCAGTGGGGTAATGCTTTCATCGAGATCTGTTTCGAATAG
Upstream 100 bases:
>100_bases AGCAGCATGGATTCAAGTTGACCAACCATGTCATTGAATCACATGGCATTTGCCAAACTTGCTCCTCCGAAATGAAAGAA TAAGATTATAGAAGAACATT
Downstream 100 bases:
>100_bases AGACAATCGAGTAAATAAAAAGCGAAAGGCTGACGTACATACGTCAGCCTTTTTTATTGCCGTAAAATCAACGGACATAA AAAACGCCAACCGAAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: CheC Domain Protein; CheC Domain-Containing Protein; CheC-Like Protein; Inhibitor Of MCP Methylation; Inhibitor Of MCP Methylation CheC-Like Protein; CheC-Like Family Protein; Chec Domain Protein; Inhibitor Of MCP Methylation CheC N; Chemotaxis Protein Phosphatase CheX; Chemotaxis Protein
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRAEFVNPFLASLMNVLKTMASLELKPQKPRVKKDEIARGDVSGLIGMVGTQSRGSMSITFDEGLALEIMENMLGERPNG LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPIVVSGKGHTIRHKCEGAIIIMPFSSQWGNAFIEICFE
Sequences:
>Translated_153_residues MRAEFVNPFLASLMNVLKTMASLELKPQKPRVKKDEIARGDVSGLIGMVGTQSRGSMSITFDEGLALEIMENMLGERPNG LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPIVVSGKGHTIRHKCEGAIIIMPFSSQWGNAFIEICFE >Mature_153_residues MRAEFVNPFLASLMNVLKTMASLELKPQKPRVKKDEIARGDVSGLIGMVGTQSRGSMSITFDEGLALEIMENMLGERPNG LNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPIVVSGKGHTIRHKCEGAIIIMPFSSQWGNAFIEICFE
Specific function: Unknown
COG id: COG1406
COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16699; Mature: 16699
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEFVNPFLASLMNVLKTMASLELKPQKPRVKKDEIARGDVSGLIGMVGTQSRGSMSIT CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCEEEE FDEGLALEIMENMLGERPNGLNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPIVVS ECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEC GKGHTIRHKCEGAIIIMPFSSQWGNAFIEICFE CCCCEEEEECCCEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure MRAEFVNPFLASLMNVLKTMASLELKPQKPRVKKDEIARGDVSGLIGMVGTQSRGSMSIT CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCEEEE FDEGLALEIMENMLGERPNGLNEEVTDMVGEITNMVTGGAKRILAESGFDFDMATPIVVS ECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEC GKGHTIRHKCEGAIIIMPFSSQWGNAFIEICFE CCCCEEEEECCCEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA