Definition | Escherichia coli UMN026 chromosome, complete genome. |
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Accession | NC_011751 |
Length | 5,202,090 |
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The map label for this gene is lfgA
Identifier: 218703521
GI number: 218703521
Start: 302073
End: 302810
Strand: Reverse
Name: lfgA
Synonym: ECUMN_0269
Alternate gene names: NA
Gene position: 302810-302073 (Counterclockwise)
Preceding gene: 218703536
Following gene: 218703520
Centisome position: 5.82
GC content: 60.03
Gene sequence:
>738_bases ATGAGTTTTCAATTTTGCAGGCGGAAGTTGTTCTTCCTCCTGGTGCTGGCCTTACCGGGCTACGCCGCCGTCCACCCCGT GCAACACAGCGCGCGGGAACAAGTCAACGCCCAGGTGCTAAATGCCGCGAGCCAGGAAATTGAATCGCTGGCGCAACAGC GGCGCTGGCATGACTATCGCTACACCTTTAAGGTCTATATTCCCTCGCAGATTGCGACCGCCGCCCCCTGTGCGACTACA CCCGGCGTCACGCTCACTTCGCCTGCGGAAATCACCCTCAACCGGATGAACTTCACCGTCAGTTGCCCGCAAAGCTGGCA GATGAACGTGGCGGTGCGCCCGGATGTTCTGGTGCCGGTGGTAATGGCGAAGTCACTGGTTGCCCGCGACACGCCGCTCA CGGCAAATGATGTGGAGTTGAAGCCCTACAACGTCAGCGCCCAGCGCCGCAATGTGTTGATGGATCCCGATGACGCGATT GGTTTCAGCAGTAAACACGCGCTGCAACCGGGCAGGCCCATCACCAAAGAAGAGCTGGTTTCGCCAGTGCTGGTCGAACG CGATCAGCCGGTGATGATTGTTTACCAGAGCGCGGGGATCACCGCCTCGATGCCCGGCGTGGCGCTGAAAAATGGTCGCA AAGGCGAGATGGTGAAAGTGCGTAACGCCAGCAGCCAGCGGGTCATCAGCGCGATGGTGGCGGAAAGCGGCGTGGTGACG ACGGTAAGCGCGGAGTAA
Upstream 100 bases:
>100_bases GTTGAAAACTGATCCCCATTTCCTGCGTCACTCCTGCTTCAATCCGCATACGCTAAGCAATCGCCGTGCCATTTTTTAAG TCACTGATGAGAAAGGGTTT
Downstream 100 bases:
>100_bases TTTGCGCAGGCGATTAAAGTTTTGCCGCCTGTTAACCGCTTTACTGGAGTAACCCACCTAAATACCGAGACGAGGTTGCG ATGAAAATCACCCCGACTAT
Product: lateral flagellar P-ring addition FlgA-like protein
Products: NA
Alternate protein names: SAF Domain-Containing Protein; Flagellar Basal Body P-Ring Biosynthesis Protein; Flagellar Basal Body P-Ring Biosynthesis Protein FlgA; Lateral Flagellar P-Ring Addition Protein; Flageller Protein FlgA; Flagellar Basal-Body P-Ring Formation Protein FlgA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSFQFCRRKLFFLLVLALPGYAAVHPVQHSAREQVNAQVLNAASQEIESLAQQRRWHDYRYTFKVYIPSQIATAAPCATT PGVTLTSPAEITLNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRNVLMDPDDAI GFSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVT TVSAE
Sequences:
>Translated_245_residues MSFQFCRRKLFFLLVLALPGYAAVHPVQHSAREQVNAQVLNAASQEIESLAQQRRWHDYRYTFKVYIPSQIATAAPCATT PGVTLTSPAEITLNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRNVLMDPDDAI GFSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVT TVSAE >Mature_244_residues SFQFCRRKLFFLLVLALPGYAAVHPVQHSAREQVNAQVLNAASQEIESLAQQRRWHDYRYTFKVYIPSQIATAAPCATTP GVTLTSPAEITLNRMNFTVSCPQSWQMNVAVRPDVLVPVVMAKSLVARDTPLTANDVELKPYNVSAQRRNVLMDPDDAIG FSSKHALQPGRPITKEELVSPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVTT VSAE
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26864; Mature: 26733
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQFCRRKLFFLLVLALPGYAAVHPVQHSAREQVNAQVLNAASQEIESLAQQRRWHDYR CCHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE YTFKVYIPSQIATAAPCATTPGVTLTSPAEITLNRMNFTVSCPQSWQMNVAVRPDVLVPV EEEEEEECCHHCCCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCEEEEEECCCHHHHH VMAKSLVARDTPLTANDVELKPYNVSAQRRNVLMDPDDAIGFSSKHALQPGRPITKEELV HHHHHHHHCCCCCCCCCCEEECCCCCHHHCCEEECCCHHCCCCCCCCCCCCCCCCHHHHC SPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVT CHHHHCCCCCEEEEEECCCCEECCCCCEECCCCCCCEEEEECCCHHHHHHHHHHCCCEEE TVSAE EEECC >Mature Secondary Structure SFQFCRRKLFFLLVLALPGYAAVHPVQHSAREQVNAQVLNAASQEIESLAQQRRWHDYR CHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE YTFKVYIPSQIATAAPCATTPGVTLTSPAEITLNRMNFTVSCPQSWQMNVAVRPDVLVPV EEEEEEECCHHCCCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCEEEEEECCCHHHHH VMAKSLVARDTPLTANDVELKPYNVSAQRRNVLMDPDDAIGFSSKHALQPGRPITKEELV HHHHHHHHCCCCCCCCCCEEECCCCCHHHCCEEECCCHHCCCCCCCCCCCCCCCCHHHHC SPVLVERDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQRVISAMVAESGVVT CHHHHCCCCCEEEEEECCCCEECCCCCEECCCCCCCEEEEECCCHHHHHHHHHHCCCEEE TVSAE EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA