Click here to switch to the map view.

The map label for this gene is lafZ [C]

Identifier: 218703536

GI number: 218703536

Start: 313981

End: 314874

Strand: Reverse

Name: lafZ [C]

Synonym: ECUMN_0284

Alternate gene names: 218703536

Gene position: 314874-313981 (Counterclockwise)

Preceding gene: 218703552

Following gene: 218703521

Centisome position: 6.05

GC content: 41.95

Gene sequence:

>894_bases
ATGCAAAGCACTATCAGGAAACATTTATCCCTTGCTAAGGTAAACTCAACTATGAGTATTATTATCAACAACTGGCGGAT
GGACCCGTCGCTTAATGCCTTAATACATTGCGAAACGGGTGAAACACGTCGTCTCGGCGAATACCATTTTATTTTGCTGG
AAACATTAGCAAAAAATGCCGATGTGGTTTTATCGCGATCTTATTTATGTGCCGAAGTATGGAAGAACCGTATTGTCGGC
GGAAACAGCCTGCCGACGGCGATCCATGCGTTGCGCGTTGCTATCGACGATGATGGCAAACAACAGAACATTATTAAAAC
AATTCCGAAGAAAGGTTACTTATGCAATAAAGAGTATGTGTCTTTGCCGGAGTCATCGCCTGCAGAAGCGCTGATTATTA
CCGACCAGATACAGGATACAGCCCCAGAAGAGATATCTTCGACAACACCGTATGTGCCTGTTAGAAAAAAACATAAAGGA
CTGATGGGGTTAGCGTTGGCCGCAGCTGTTATATTGGTTGGCTCAACCGTGGGGTATTCACACTTGAAAAGTACACCTGA
CGCCCCGCAACTGGTAAAAGAGTCAATTAACAGTCCAAGAATAAAAATATTTCATCTTAGTTCTGGAAAGGAAAATAATT
CCGTACCGTTACTGTCACAAACCCTCGCACCAGGAAAAGACAAACTCGATAATTTATTGTCAGCGCATAATATGACAATG
ACAACCTATTATAAATATGTTCGTAACCGACTGGAGAGTGATATTGTTCTGCGCAACCAGTGCAACGGTAGCTGGCAATT
AACTTTTAATGTGGATAGCTGGCAGAATAGCGATATTAATAGCGCGATGTATCAGAATTTAGAGAAGTTGTTAAATACTG
TGCAGAAATGCTGA

Upstream 100 bases:

>100_bases
TTTCCACGCTATATAGTGATTAAGAATAATCTTATCACCATAAAATATTAATTATCACGCAGAAAAATCATCTTCTCAGG
GACGTATAAGACTGTGCTTT

Downstream 100 bases:

>100_bases
TGTTTACCGGATTAGATACCGTTTTATCTAATCCGGTTCATAAAATGCACCCCAAAATTAAATCTGAAATGCAATTCTCT
TACCATTCGGCAGTTTAACG

Product: lateral flagellar transmembrane regulator

Products: NA

Alternate protein names: Regulatory Protein; Lateral Flagellar Transmembrane Regulator; Transcriptional Regulatory Protein

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQSTIRKHLSLAKVNSTMSIIINNWRMDPSLNALIHCETGETRRLGEYHFILLETLAKNADVVLSRSYLCAEVWKNRIVG
GNSLPTAIHALRVAIDDDGKQQNIIKTIPKKGYLCNKEYVSLPESSPAEALIITDQIQDTAPEEISSTTPYVPVRKKHKG
LMGLALAAAVILVGSTVGYSHLKSTPDAPQLVKESINSPRIKIFHLSSGKENNSVPLLSQTLAPGKDKLDNLLSAHNMTM
TTYYKYVRNRLESDIVLRNQCNGSWQLTFNVDSWQNSDINSAMYQNLEKLLNTVQKC

Sequences:

>Translated_297_residues
MQSTIRKHLSLAKVNSTMSIIINNWRMDPSLNALIHCETGETRRLGEYHFILLETLAKNADVVLSRSYLCAEVWKNRIVG
GNSLPTAIHALRVAIDDDGKQQNIIKTIPKKGYLCNKEYVSLPESSPAEALIITDQIQDTAPEEISSTTPYVPVRKKHKG
LMGLALAAAVILVGSTVGYSHLKSTPDAPQLVKESINSPRIKIFHLSSGKENNSVPLLSQTLAPGKDKLDNLLSAHNMTM
TTYYKYVRNRLESDIVLRNQCNGSWQLTFNVDSWQNSDINSAMYQNLEKLLNTVQKC
>Mature_297_residues
MQSTIRKHLSLAKVNSTMSIIINNWRMDPSLNALIHCETGETRRLGEYHFILLETLAKNADVVLSRSYLCAEVWKNRIVG
GNSLPTAIHALRVAIDDDGKQQNIIKTIPKKGYLCNKEYVSLPESSPAEALIITDQIQDTAPEEISSTTPYVPVRKKHKG
LMGLALAAAVILVGSTVGYSHLKSTPDAPQLVKESINSPRIKIFHLSSGKENNSVPLLSQTLAPGKDKLDNLLSAHNMTM
TTYYKYVRNRLESDIVLRNQCNGSWQLTFNVDSWQNSDINSAMYQNLEKLLNTVQKC

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33120; Mature: 33120

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTIRKHLSLAKVNSTMSIIINNWRMDPSLNALIHCETGETRRLGEYHFILLETLAKNA
CCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCC
DVVLSRSYLCAEVWKNRIVGGNSLPTAIHALRVAIDDDGKQQNIIKTIPKKGYLCNKEYV
CEEEEHHHHHHHHHHHHCCCCCCCHHHHHHEEEEECCCCCCCHHHHHCCCCCCEECHHHH
SLPESSPAEALIITDQIQDTAPEEISSTTPYVPVRKKHKGLMGLALAAAVILVGSTVGYS
CCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHH
HLKSTPDAPQLVKESINSPRIKIFHLSSGKENNSVPLLSQTLAPGKDKLDNLLSAHNMTM
HHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCHH
TTYYKYVRNRLESDIVLRNQCNGSWQLTFNVDSWQNSDINSAMYQNLEKLLNTVQKC
HHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSTIRKHLSLAKVNSTMSIIINNWRMDPSLNALIHCETGETRRLGEYHFILLETLAKNA
CCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCC
DVVLSRSYLCAEVWKNRIVGGNSLPTAIHALRVAIDDDGKQQNIIKTIPKKGYLCNKEYV
CEEEEHHHHHHHHHHHHCCCCCCCHHHHHHEEEEECCCCCCCHHHHHCCCCCCEECHHHH
SLPESSPAEALIITDQIQDTAPEEISSTTPYVPVRKKHKGLMGLALAAAVILVGSTVGYS
CCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHH
HLKSTPDAPQLVKESINSPRIKIFHLSSGKENNSVPLLSQTLAPGKDKLDNLLSAHNMTM
HHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCHH
TTYYKYVRNRLESDIVLRNQCNGSWQLTFNVDSWQNSDINSAMYQNLEKLLNTVQKC
HHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA