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The map label for this gene is yfeN

Identifier: 218700874

GI number: 218700874

Start: 2650871

End: 2651650

Strand: Direct

Name: yfeN

Synonym: ECIAI39_2553

Alternate gene names: 218700874

Gene position: 2650871-2651650 (Clockwise)

Preceding gene: 218700866

Following gene: 218700875

Centisome position: 51.65

GC content: 42.69

Gene sequence:

>780_bases
GTGGAACATACTATGAAAAAACAGCTTCTTGCATTAAGCCTTGGTCTGGTTCCCATGGCTTTTCCGCAAATGTCTTATGC
CGAGTTTAAAGGGGGCTTTGCTGACATTGGTCTGCATTATCTTGACTGGACATCCCGCACGACAGAGAAAACCAGTAATA
AGTCCCATAAAGATGATTTTGGCTATCTGGAATTAGAAGGTGGTGCTAACTTTAGTTGGGGAGAAATGTACGGGTTCTTC
GATTGGGAGAACTTCTATAATGGCCGACATTCAAAATCTGGCAGTGAACAACGTTATACTTTTAAAAGTACCAACCGCAT
TTATCTTGGTGATACAGGACTGAATCTTTATCTTCACGCTTACGGGACTTACGGTTCACCTGAACGTGTTAACTTCTATG
ATGATACATTCCTTTACGGGCTTGGATACAATTTTACGGGAAATGGTTACTGGTTTAAGCCATTCTTCGCGAAACGTTAC
ACCGATCAAACCTATTATACCGGTGACAATGGCTATGTTTTGGGCTGGGTTGCCGGATACAGTTTCACGCTTGGTAGCGA
AAAATTCAGCCTGACTAACTGGAATGAATACGAATTCGACCGCGACGCTACATATGCAGCAGGTAATGGCGGAAAAGAAG
GTATAAACGGAGCAGTAGCGTTTTGGTGGAATGCGACACCGCATTTTACGGCAGGGATTCAATATCGCTACGCAGATAAT
AAACTGGGTGAAGCCTTCCTCCAGGATGGCATTATTTATTCAATAAAATATCAGTTCTAA

Upstream 100 bases:

>100_bases
TGTATTGGTTAGAGATGTCATAAATCTAATAAAATAGACATGCCAAATAATTACAGCATAAATATGTAAGCATATCACAT
TCATTAAATTTATTACTTAA

Downstream 100 bases:

>100_bases
ACCTGCGTTGATAACACTAAAACGGCTACGGTCGTCAGCAATAATATTACAGCGGTCATCAAGCGCACTCATTGACCGCC
CTGATTTGATTCGTTCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MEHTMKKQLLALSLGLVPMAFPQMSYAEFKGGFADIGLHYLDWTSRTTEKTSNKSHKDDFGYLELEGGANFSWGEMYGFF
DWENFYNGRHSKSGSEQRYTFKSTNRIYLGDTGLNLYLHAYGTYGSPERVNFYDDTFLYGLGYNFTGNGYWFKPFFAKRY
TDQTYYTGDNGYVLGWVAGYSFTLGSEKFSLTNWNEYEFDRDATYAAGNGGKEGINGAVAFWWNATPHFTAGIQYRYADN
KLGEAFLQDGIIYSIKYQF

Sequences:

>Translated_259_residues
MEHTMKKQLLALSLGLVPMAFPQMSYAEFKGGFADIGLHYLDWTSRTTEKTSNKSHKDDFGYLELEGGANFSWGEMYGFF
DWENFYNGRHSKSGSEQRYTFKSTNRIYLGDTGLNLYLHAYGTYGSPERVNFYDDTFLYGLGYNFTGNGYWFKPFFAKRY
TDQTYYTGDNGYVLGWVAGYSFTLGSEKFSLTNWNEYEFDRDATYAAGNGGKEGINGAVAFWWNATPHFTAGIQYRYADN
KLGEAFLQDGIIYSIKYQF
>Mature_259_residues
MEHTMKKQLLALSLGLVPMAFPQMSYAEFKGGFADIGLHYLDWTSRTTEKTSNKSHKDDFGYLELEGGANFSWGEMYGFF
DWENFYNGRHSKSGSEQRYTFKSTNRIYLGDTGLNLYLHAYGTYGSPERVNFYDDTFLYGLGYNFTGNGYWFKPFFAKRY
TDQTYYTGDNGYVLGWVAGYSFTLGSEKFSLTNWNEYEFDRDATYAAGNGGKEGINGAVAFWWNATPHFTAGIQYRYADN
KLGEAFLQDGIIYSIKYQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=240, Percent_Identity=85.8333333333333, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 29787; Mature: 29787

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHTMKKQLLALSLGLVPMAFPQMSYAEFKGGFADIGLHYLDWTSRTTEKTSNKSHKDDF
CCHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCHHHCCEEEEECCCCCCHHCCCCCCCCCC
GYLELEGGANFSWGEMYGFFDWENFYNGRHSKSGSEQRYTFKSTNRIYLGDTGLNLYLHA
CEEEECCCCCCCHHHEEEEECHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEE
YGTYGSPERVNFYDDTFLYGLGYNFTGNGYWFKPFFAKRYTDQTYYTGDNGYVLGWVAGY
EECCCCCCEEEEECCEEEEEECCEECCCCEEECCHHHHHCCCCEEEECCCCEEEEEEECE
SFTLGSEKFSLTNWNEYEFDRDATYAAGNGGKEGINGAVAFWWNATPHFTAGIQYRYADN
EEEECCCEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCEEECEEEEECCC
KLGEAFLQDGIIYSIKYQF
HHHHHHHHCCEEEEEEECC
>Mature Secondary Structure
MEHTMKKQLLALSLGLVPMAFPQMSYAEFKGGFADIGLHYLDWTSRTTEKTSNKSHKDDF
CCHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCHHHCCEEEEECCCCCCHHCCCCCCCCCC
GYLELEGGANFSWGEMYGFFDWENFYNGRHSKSGSEQRYTFKSTNRIYLGDTGLNLYLHA
CEEEECCCCCCCHHHEEEEECHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEE
YGTYGSPERVNFYDDTFLYGLGYNFTGNGYWFKPFFAKRYTDQTYYTGDNGYVLGWVAGY
EECCCCCCEEEEECCEEEEEECCEECCCCEEECCHHHHHCCCCEEEECCCCEEEEEEECE
SFTLGSEKFSLTNWNEYEFDRDATYAAGNGGKEGINGAVAFWWNATPHFTAGIQYRYADN
EEEECCCEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCEEECEEEEECCC
KLGEAFLQDGIIYSIKYQF
HHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]