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The map label for this gene is yncK

Identifier: 218700866

GI number: 218700866

Start: 2642320

End: 2642556

Strand: Direct

Name: yncK

Synonym: ECIAI39_2545

Alternate gene names: NA

Gene position: 2642320-2642556 (Clockwise)

Preceding gene: 218700865

Following gene: 218700874

Centisome position: 51.49

GC content: 43.88

Gene sequence:

>237_bases
TTGTGTTTTCCTGATGCATGTTCACCTGGTCTTTGTCCCAAATACCGACGCCAGATTTTTGACCATGACGCGACAGAAAA
ACTACGCACTTACTTTTCAAATGTATGTGCTGATTTTGAAGCTGAACTGGTTGAAATGGATGGCGAACCAGATCACGTCC
ATTTGTTAATTAACTATCCTCCCAAACTGGCGATATCCAGTCTGGTAAACAGCCTCAAAGGCGTATCGGGTAGGTGA

Upstream 100 bases:

>100_bases
CACCGGGTCTTAACTGGAATTTAAATGCCTGTAGTCGTTTCACAGGTCAAATTATATTTTGGTCTGTGAAAAAAGAAACT
GATATCCGGCGTGGAAGGCA

Downstream 100 bases:

>100_bases
CTGCGACGAGATCGACCAGATATTGCAGTCAGGTATTACTACAAAGGCGTTTTGTGGAGTCCTGGCTATTTTGCCAGTAG
CTGCGGAGGTGCGCCAATAT

Product: transposase ORF A (remnant), IS609

Products: NA

Alternate protein names: IS Element Transposase; Transposase ORF A; Transposase TnA; LOW QUALITY PROTEIN Transposase; ISSoc3 Transposase; Transposase Family Protein; Transposase IS; ISSoc3 OrfA Transposase

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MCFPDACSPGLCPKYRRQIFDHDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVSGR

Sequences:

>Translated_78_residues
MCFPDACSPGLCPKYRRQIFDHDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVSGR
>Mature_78_residues
MCFPDACSPGLCPKYRRQIFDHDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVSGR

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8758; Mature: 8758

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFPDACSPGLCPKYRRQIFDHDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYP
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECC
PKLAISSLVNSLKGVSGR
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MCFPDACSPGLCPKYRRQIFDHDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYP
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECC
PKLAISSLVNSLKGVSGR
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA