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The map label for this gene is yfcN

Identifier: 218700807

GI number: 218700807

Start: 2568880

End: 2569431

Strand: Direct

Name: yfcN

Synonym: ECIAI39_2480

Alternate gene names: 218700807

Gene position: 2568880-2569431 (Clockwise)

Preceding gene: 218700800

Following gene: 218700808

Centisome position: 50.06

GC content: 51.63

Gene sequence:

>552_bases
ATGAAAAAGAAAACAACACTTAGCGAGGAGGACCAGGCGCTGTTTCGCCAGTTGATGGCGGGGACTCGCAAGATTAAGCA
GGACACGATTGTCCACCGACCGCAGCGTAAAAAAATCAGCGAAGTACCGGTCAAGCGGTTGATTCAGGAGCAGGCCGATG
CCAGCCATTATTTCTCTGACGAGTTTCAACCATTATTAAATACTGAAGGTCCGGTGAAATATGTTCGCCCGGATGTCAGC
CATTTTGAAGCGAAGAAACTGCGGCGCGGTGATTATTCACCGGAGCTGTTTTTGGATTTGCACGGTTTGACGCAGCTGCA
AGCCAAGCAGGAGTTAGGCGCATTGATTGCCGCCTGCCGCCGCGAACATGTGTTTTGCGCCTGTGTGATGCATGGTCATG
GTAAGCATATTTTGAAGCAGCAAACGCCACTGTGGCTGGCGCAACATCCCCATGTAATGGCATTTCATCAGGCACCGAAA
GTGTACGGTGGTGATGCGGCATTGCTGGTGTTGATAGAAGTGGATGAGTGGCTGCCGCCGGAATTGCCCTGA

Upstream 100 bases:

>100_bases
CAGCATTCACGCGCGGTGAGTGAGGAAAAATACGTTTAAAACGATCGATTGTGCTACGAGTCGGGTAAACTGTAAGAAAA
TTAGAAATAGAGACAGTTAA

Downstream 100 bases:

>100_bases
CATCATGACGGGCATACGCTTTCACTGACAGACGTCGACGGTTAAGTGTAAGATTATCCAAACAGAACTCAACGCAGGGC
ACTCAATGATGAATATCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
VYGGDAALLVLIEVDEWLPPELP

Sequences:

>Translated_183_residues
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
VYGGDAALLVLIEVDEWLPPELP
>Mature_183_residues
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVS
HFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
VYGGDAALLVLIEVDEWLPPELP

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=183, Percent_Identity=98.9071038251366, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20970; Mature: 20970

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACR
HHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKVYGGDAALLVLIEVDEWLPP
HCCEEEEEEECCCCHHHHHCCCCEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCC
ELP
CCC
>Mature Secondary Structure
MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACR
HHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKVYGGDAALLVLIEVDEWLPP
HCCEEEEEEECCCCHHHHHCCCCEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCC
ELP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]