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The map label for this gene is ntaR [H]

Identifier: 218700701

GI number: 218700701

Start: 2454643

End: 2455341

Strand: Direct

Name: ntaR [H]

Synonym: ECIAI39_2372

Alternate gene names: 218700701

Gene position: 2454643-2455341 (Clockwise)

Preceding gene: 218700693

Following gene: 218700702

Centisome position: 47.83

GC content: 34.76

Gene sequence:

>699_bases
ATGAGAGATAAAGCGAAACGTGACTTAAGTCACATATCAATTGAGATACCAAAATCCGTAACACAGGTCATTAAAGAAAA
AATCAGGGATATGATAATTCATGGCGATCTTAGTCTTGGGCAACCGATAAGTGAAAATGAATTATCGAATATTCTGGCGG
TAAGTAAAACACCTATTCGTGAAGCTTTTATTTTACTTAGTCACAATGAAAATCTGATCAATATCATTCCACGCAGCGGA
ACATTCGTTTTTTCCGTAACAGATAAAGATATTAATGACCTCATAAAAATGAGAGTAATTCTGGAGCAGGGAGCAATTCG
TGAAGCAATGGAAAAGAATGCAAACAATGTCATCATTGAACTAAATAGTATACTATCAAAATCAGCAAAAATTAATGCCG
AGCGCGATACTCAGGCTTATCTTAAACTGGATCATGATTTTCATTATGTGTTTGTTAAATACGCTGATAATAAATACATC
TCTCAGGCACACCAATTGATATCCGCACGTTTACTTGCTATTCGTTATCGACTGGATTTCACTACGGAATATATCACCAA
TTCAAATCGTGGCCATGCTACTATTTTAGATATGCTAAAAAATAATAACGTTGAAGGTGTTTGTAATTTTATTACTCATC
ACGTAAGTAGTGGATTTACCGAGCGTGCACGTAAAATTCTCTCGTTATCTACACAGTAA

Upstream 100 bases:

>100_bases
CAATAAGATATATCATTTTTGTCATATCTGATATATTAGACACCTTCATTGATAAAATGATTACATATAATGGACCAGCA
GCTTAATAAGGGGCAAAGGA

Downstream 100 bases:

>100_bases
AATGTGAATGAGTTTATAACACTGGCACTTTTCACCTGCTATACTGCCCGACAACCTTTATAGACTCTTATGTAACAATG
AACACTGAAAATCTCCTTAA

Product: transcriptional regulator, GntR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRDKAKRDLSHISIEIPKSVTQVIKEKIRDMIIHGDLSLGQPISENELSNILAVSKTPIREAFILLSHNENLINIIPRSG
TFVFSVTDKDINDLIKMRVILEQGAIREAMEKNANNVIIELNSILSKSAKINAERDTQAYLKLDHDFHYVFVKYADNKYI
SQAHQLISARLLAIRYRLDFTTEYITNSNRGHATILDMLKNNNVEGVCNFITHHVSSGFTERARKILSLSTQ

Sequences:

>Translated_232_residues
MRDKAKRDLSHISIEIPKSVTQVIKEKIRDMIIHGDLSLGQPISENELSNILAVSKTPIREAFILLSHNENLINIIPRSG
TFVFSVTDKDINDLIKMRVILEQGAIREAMEKNANNVIIELNSILSKSAKINAERDTQAYLKLDHDFHYVFVKYADNKYI
SQAHQLISARLLAIRYRLDFTTEYITNSNRGHATILDMLKNNNVEGVCNFITHHVSSGFTERARKILSLSTQ
>Mature_232_residues
MRDKAKRDLSHISIEIPKSVTQVIKEKIRDMIIHGDLSLGQPISENELSNILAVSKTPIREAFILLSHNENLINIIPRSG
TFVFSVTDKDINDLIKMRVILEQGAIREAMEKNANNVIIELNSILSKSAKINAERDTQAYLKLDHDFHYVFVKYADNKYI
SQAHQLISARLLAIRYRLDFTTEYITNSNRGHATILDMLKNNNVEGVCNFITHHVSSGFTERARKILSLSTQ

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=213, Percent_Identity=26.2910798122066, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26430; Mature: 26430

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDKAKRDLSHISIEIPKSVTQVIKEKIRDMIIHGDLSLGQPISENELSNILAVSKTPIR
CCCHHHHHHHHEEEECCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCCCCHH
EAFILLSHNENLINIIPRSGTFVFSVTDKDINDLIKMRVILEQGAIREAMEKNANNVIIE
HEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LNSILSKSAKINAERDTQAYLKLDHDFHYVFVKYADNKYISQAHQLISARLLAIRYRLDF
EHHHHCCHHCCCCCCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEECC
TTEYITNSNRGHATILDMLKNNNVEGVCNFITHHVSSGFTERARKILSLSTQ
HHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDKAKRDLSHISIEIPKSVTQVIKEKIRDMIIHGDLSLGQPISENELSNILAVSKTPIR
CCCHHHHHHHHEEEECCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCCCCHH
EAFILLSHNENLINIIPRSGTFVFSVTDKDINDLIKMRVILEQGAIREAMEKNANNVIIE
HEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LNSILSKSAKINAERDTQAYLKLDHDFHYVFVKYADNKYISQAHQLISARLLAIRYRLDF
EHHHHCCHHCCCCCCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEECC
TTEYITNSNRGHATILDMLKNNNVEGVCNFITHHVSSGFTERARKILSLSTQ
HHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA