Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is yejA
Identifier: 218700649
GI number: 218700649
Start: 2386519
End: 2388333
Strand: Direct
Name: yejA
Synonym: ECIAI39_2318
Alternate gene names: 218700649
Gene position: 2386519-2388333 (Clockwise)
Preceding gene: 218700648
Following gene: 218700650
Centisome position: 46.5
GC content: 50.36
Gene sequence:
>1815_bases ATGATTGTGCGCATACTGCTGCTGTTTATCGCTCTGTTCACCTTTGGTGCGCAGGCGCAGACTATCAAGGAAAGCTATGC CTTTGCCGTACTGGGCGAACCCCGGTACGCATTTAATTTCAACCATTTTGATTATGTGAACCCCGCCGCGCCAAAAGGTG GGCAAATAACGTTGTCTGCCCTCGGCACCTTCGATAATTTCAACCGCTATGCACTGCGCGGCAATCCGGGCGCACGCACC GAGCAGCTGTACGACACGCTATTTACGACTTCCGATGACGAACCAGGCAGTTATTACCCGCTGATTGCTGAAAGCGCACG CTATGCTGACGATTATTCCTGGGTGGAGGTCGCTATTAATCCACGCGCCCGTTTTCATGATGGTTCGCCCATTACTGCCC GCGATGTAGAGTTTACTTTTCAAAAATTTATGACCGAAGGCGTGCCGCAATTTCGTCTGGTCTACAAAGGCACCACCGTC AAAGCCATTGCGCCGTTAACCGTGCGTATTGAGTTAGCTAAACCCGGCAAAGAAGATATGCTGAGTCTGTTTTCGCTGCC GGTATTTCCAGAAAAGTACTGGAAAGATCACAAACTTAGCGACCCGCTCGCCACGCCTCCGCTTGCCAGTGGTCCGTACC GCATTATGTCCTGGAAAATGGGGCAAAATATTGTCTATTCCCGCGTAAAAGATTACTGGGCAGCAAACTTACCGGTAAAC CGTGGACGCTGGAATTTCGACACCATTCGCTACGATTATTACCTCGATGATAATGTCGCCTTTGAAGCGTTTAAAGCAGG TGCCTTTGATTTGCGTATGGAAAACGACGCCAAAAACTGGGCCACGCGCTATACCGGTAAAAATTTCGATAAAAAATACA TCATCAAAGATGAGCAAAAGAACGAATCAGCCCAGGATACGCGCTGGCTGGCGTTTAATATCCAACGTCCGGTATTCAGC GATCGCCGGGTGCGGGAAGCGATCACTCTCGCCTTTGACTTTGAATGGATGAACAAAGCGTTGTTTTACAATGCCTGGAG TCGCACGAACAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCAC CAATGAAAAAAGATCTACCGCCAGAAGTCTTCACGCAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCTACGATCGT GACAACCTGTTAAAAGCCGACAAACTTCTTAACGAAGCAGGCTGGGTGCTGAAGGGTCAGCAACGCGTTAATGCCACAAC GGGTCAGCCACTCAGCTTTGAATTATTGCTTCCCTCAAGCAGTAATAGTCAGTGGGTATTGCCGTTCCAGCACAGCCTGC AACGTCTGGGTATCAACATGGATATTCGCAAGGTGGATAACTCTCAAATCACCAACCGCATGCGCAGTCGCGACTATGAC ATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTC CACTTATAATGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCGCTGATCAACCAAATTATTGCCGCGCAGGGAAATAAAG AAAAATTACTGCCGTTGGGGCGAGCACTGGATCGCGTATTAACGTGGAATTATTACATGCTGCCAATGTGGTATATGGCG GAAGACCGTCTCGCCTGGTGGGATAAATTCTCCCACCCCGCTGTACGCCCTGTTTACAGCCTGGGTATCGATACCTGGTG GTATGACGTTAACAAAGCGACGAAACTGCCGTCAGCCAGACAACAGGGAGAGTAG
Upstream 100 bases:
>100_bases GTATACGCCGCAGTGGTAAGGTGTGCTTACGTCCCTTATTATTCATAGTGAAAGCATGCCGGATTGCGGCTAATGATGAG TAAAAGGAAATCCGTTGCAG
Downstream 100 bases:
>100_bases ATGGGCGCTTATCTGATTCGCCGTCTGTTGCTGGTGATCCCAACGCTATGGGCGATTATCACTATCAACTTTTTCATCGT GCAAATTGCGCCTGGCGGTC
Product: putative oligopeptide ABC transporter subunit periplasmic-binding protein transporter
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MIVRILLLFIALFTFGAQAQTIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRIMSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPSSSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYD MMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSHPAVRPVYSLGIDTWWYDVNKATKLPSARQQGE
Sequences:
>Translated_604_residues MIVRILLLFIALFTFGAQAQTIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRIMSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPSSSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYD MMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSHPAVRPVYSLGIDTWWYDVNKATKLPSARQQGE >Mature_604_residues MIVRILLLFIALFTFGAQAQTIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRIMSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPSSSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYD MMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSHPAVRPVYSLGIDTWWYDVNKATKLPSARQQGE
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae hbpA [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=604, Percent_Identity=98.1788079470199, Blast_Score=1223, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 69836; Mature: 69836
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRILLLFIALFTFGAQAQTIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA CHHHHHHHHHHHHHCCCHHHHHHHCEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEE LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN ECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC PRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM CCCEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRIMSWKMGQNIVYSRVKDYWAANLPVN HHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCC RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQK CCCCCCEEEEEEEEECCCCEEHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCC NESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA CCCCCCCEEEEEEECCCCCCCHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHHCCCHHH RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ CCCCCHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC QRVNATTGQPLSFELLLPSSSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYD CEECCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCC MMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG HHHHHHHCCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSHPAVRPVYSLGIDTWWYDVNKATKLPSAR HHHHHHHCCCEEEEEEEEECCCHHHHHHHCCCCCCCHHHHCCCCEEEEECCHHHCCCCHH QQGE HCCC >Mature Secondary Structure MIVRILLLFIALFTFGAQAQTIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA CHHHHHHHHHHHHHCCCHHHHHHHCEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEE LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN ECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC PRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM CCCEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRIMSWKMGQNIVYSRVKDYWAANLPVN HHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCC RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQK CCCCCCEEEEEEEEECCCCEEHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCC NESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA CCCCCCCEEEEEEECCCCCCCHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHHCCCHHH RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ CCCCCHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC QRVNATTGQPLSFELLLPSSSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYD CEECCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCC MMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG HHHHHHHCCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSHPAVRPVYSLGIDTWWYDVNKATKLPSAR HHHHHHHCCCEEEEEEEEECCCHHHHHHHCCCCCCCHHHHCCCCEEEEECCHHHCCCCHH QQGE HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 9097040 [H]