Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is yeiR
Identifier: 218700645
GI number: 218700645
Start: 2381984
End: 2382970
Strand: Direct
Name: yeiR
Synonym: ECIAI39_2314
Alternate gene names: 218700645
Gene position: 2381984-2382970 (Clockwise)
Preceding gene: 218700644
Following gene: 218700646
Centisome position: 46.41
GC content: 54.61
Gene sequence:
>987_bases GTGACCAGAACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACTACGTCGATTCTTCATCTGTTAGCCCATAAAGA TCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGGAATTGATGGTGCTTTGCTCGCCGATAGCGGCG CATTGTTGAAAGAGATCCCCGGCGGCTGTATGTGCTGCGTTAATGGTTTACCCATGCAGGTAGGGTTGAATACCTTACTG CGTCAGGGAAAACCAGACCGCTTGTTGATAGAGCCGACCGGGCTGGGCCATCCGAAACAGATCCTCGATCTCTTAACCGC GCCCGTGTATGAACCGTGGATAGATCTGCGCGCCACGTTGTGCATTCTCGATCCACGCCTGCTGCTGGACGAAAAAAGCG CCAGCAATGAAAACTTCCGTGACCAGCTGGCTGCCGCAGACATTATTGTCGCCAATAAATCCGACCGTGCGACGCCCGAA AGTGAGCAAGCGCTACAGCGCTGGTGGCAGCAAAATGGTGGCGATCGGCAATTAATTCACAGCGCGCATGGGAAAGTTGA CGGTCATCTTCTGGATTTGCCGCGTCGCAATTTAGCCGAGTTGCCCGCCAGCGCCGCGCATTCTCATCAGCATGTCGTGA AAAAAGGGTTAGCAGCGTTAAGCCTGCCAGAGCATCAACGCTGGCGTCGCAGTCTGAACAGCGGGCAAGGATATCAGGCC TGCGGCTGGATATTCGACGCTGATACGGTATTCGACACCATTGGCATTCTGGAATGGGCGCGACTTGCACCGGTAGAACG CGTCAAAGGCGTGCTGCGTATTCCCGAAGGGCTGGTGCGAATCAACCGTCAGGGCGATGACCTGCACATTGAAACGCAAA ACGTTGCGCCACCGGACAGCCGTATTGAGCTGATTTCCAGCAGCGAAGCTGACTGGAATGCCTTGCAGAGCGCGCTGTTG AAGCTTCGTTTAGCGACTACCGCGTAA
Upstream 100 bases:
>100_bases GCGGATGAAGCTCGCCTTCGTCCGCTCTCCCCTTCTCTTTTCTGCCTTTTTTAGCCAGGATTAACGCTCAGTTAACTTTT AAGAGTATTGCGGAGCCGTT
Downstream 100 bases:
>100_bases GGTTGCCTGCGTTTTTCAGTACGATAATTAGAGAAAATATGATTAAAAATTTGCCGCAAATAGTGTTGTTGAATATTGTC GGCCTCGCGCTGTTTCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLL RQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE SEQALQRWWQQNGGDRQLIHSAHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQA CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALL KLRLATTA
Sequences:
>Translated_328_residues MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLL RQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE SEQALQRWWQQNGGDRQLIHSAHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQA CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALL KLRLATTA >Mature_327_residues TRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLR QGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPES EQALQRWWQQNGGDRQLIHSAHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQAC GWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLK LRLATTA
Specific function: Unknown
COG id: COG0523
COG function: function code R; Putative GTPases (G3E family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cobW C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI126722884, Length=240, Percent_Identity=28.75, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI33469141, Length=240, Percent_Identity=28.75, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI148727351, Length=239, Percent_Identity=28.8702928870293, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI146231952, Length=239, Percent_Identity=28.8702928870293, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI223941779, Length=233, Percent_Identity=29.6137339055794, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI223941776, Length=233, Percent_Identity=27.8969957081545, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1788499, Length=328, Percent_Identity=99.390243902439, Blast_Score=661, Evalue=0.0, Organism=Escherichia coli, GI87082430, Length=195, Percent_Identity=32.3076923076923, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR011629 [H]
Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]
EC number: NA
Molecular weight: Translated: 36026; Mature: 35894
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIP CCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHCC GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL CCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH CILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPESEQALQRWWQQNGGDRQLIH EEECCHHHCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHH SAHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQA HHCCCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDS EEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEECCCCCEEEEEECCCCCCHH RIELISSSEADWNALQSALLKLRLATTA HEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIP CCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHCC GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL CCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH CILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPESEQALQRWWQQNGGDRQLIH EEECCHHHCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHH SAHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQA HHCCCCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDS EEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEECCCCCEEEEEECCCCCCHH RIELISSSEADWNALQSALLKLRLATTA HEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]