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The map label for this gene is hrpA

Identifier: 218700087

GI number: 218700087

Start: 1800054

End: 1803899

Strand: Direct

Name: hrpA

Synonym: ECIAI39_1718

Alternate gene names: 218700087

Gene position: 1800054-1803899 (Clockwise)

Preceding gene: 218700086

Following gene: 218700088

Centisome position: 35.07

GC content: 53.64

Gene sequence:

>3846_bases
ATGCTGCGCGACAGACAGCGTTTTTCTCGCCGTCTGCACGGTGTTAAGAAGGTTAAAAATCCTGATGCACAACAGGCCAT
TTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTACTGCTGCGTGAAGCGGCACGACCGGAAATCACTT
ATCCCGACAATTTGCCGGTTAGTCAGAAAAAGCAGGACATTCTCGACGCGATTCGTGATCACCAGGTGGTGATCGTCGCC
GGGGAAACCGGTTCCGGTAAAACGACTCAGCTACCGAAAATCTGTATGGAGCTGGGGCGCGGTATTAAAGGGCTGATCGG
TCATACCCAACCGCGTCGCCTGGCGGCACGAACGGTGGCTAACCGTATTGCGGAAGAGCTGAAAACGGAGCCGGGCGGTT
GCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTG
GCAGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACCATCATTATTGACGAAGCGCACGAACGCAGCCTGAATAT
CGATTTTCTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCG
ACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATCGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGC
TATCGCCCGATTGTTGAAGAAGCTGATGACACCGAGCGCGACCAGTTGCAGGCGATTTTTGATGCCGTAGACGAACTGAG
CCAGGAAAGCCCTGGCGACATTCTGATCTTTATGAGCGGTGAGCGGGAAATTCGCGATACCGCCGATGCGCTGAACAAGC
TAAATCTGCGGCATACCGAAATCTTGCCGCTTTATGCGCGGCTTTCGAACAGCGAACAGAACCGCGTGTTCCAGTCGCAC
AGTGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACCTCGCTGACCGTACCGGGTATTAAATACGTTATCGACCC
CGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAACCCATTTCGCAGGCGTCTG
CCAATCAGCGTAAAGGCCGCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTTTCG
CGCCCGGAATTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACTGCGCTGGGGCTGGG
CGATATCGCTGCGTTCCCGTTTGTTGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAGAACTGG
GCGCGATCACCACGGATGAACAGGCCAGCGCCTATAAACTGACGCCGCTCGGTCGCCAGCTCTCGCAGTTGCCTGTCGAC
CCACGTCTGGCGCGTATGGTGCTGGAAGCGCAAAAACATGGCTGCGTGCGTGAGGCGATGATTATCACGTCCGCGCTCTC
CATTCAGGATCCGCGCGAGCGTCCGATGGATAAACAGCAGGCATCGGACGAAAAACATCGTCGCTTCCACGACAAAGAAT
CCGACTTCCTCGCGTTTGTAAATCTGTGGAATTATCTTGGCGAGCAGCAAAAGGCGCTTTCTTCCAACGCCTTCCGTCGC
CTGTGTCGTACCGATTATCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACTCAGTTGCGCCAGGTGGTGAA
AGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATCGCCTTACTGACCGGTTTGCTTTCCC
ATATCGGCATGAAAGATGCCGATAAACAAGAATATACCGGCGCACGTAACGCGCGTTTCTCCATTTTCCCCGGTTCCGGC
TTATTTAAAAAGCCGCCGAAATGGGTAATGGTGGCGGAACTGGTAGAAACCAGCCGCCTGTGGGGGCGTATTGCTGCGCG
TATCGACCCTGAATGGGTAGAACCCGTTGCTCAGCATTTGATTAAACGCACCTACAGCGAACCGCACTGGGAACGGGCGC
AGGGCGCGGTGATGGCAACGGAAAAAGTCACTGTTTATGGTTTGCCGATTGTTGCCGCGCGCAAGGTCAACTACAGCCAG
ATTGATCCGGCGTTATGTCGTGAACTCTTTATTCGCCACGCTCTGGTGGAAGGTGACTGGCAGACGCGTCACGCATTCTT
CCGTGAAAACCTGAAACTGCGGGCCGAAGTGGAAGAGCTGGAACACAAATCACGTCGCCGCGATATTCTGGTTGATGACG
AAGCGTTGTTTGAGTTCTACGACCAGCGCATCAGCCACGATGTAATCTCCGCTCGTCACTTCGACAGCTGGTGGAAAAAA
GTCAGCCGCGAAACGCCTGATTTGCTCAACTTTGAAAAGAGCATGTTGATCAAAGAAGGGGCGGAAAAAATCAGCAAGCT
GGATTATCCGAACTTCTGGCATCAGGGCAATCTCAAGCTGCGTTTGAGCTATCAGTTTGAGCCCGGCGCGGATGCTGACG
GTGTGACTGTGCATATCCCGCTGCCGTTACTTAACCAGGTTGAGGAGAGTGGGTTTGAGTGGCAGATCCCCGGTCTGCGC
CGCGAACTGGTGATTGCTCTGATTAAATCGTTGCCGAAACCGGTACGCCGTAATTTTGTACCTGCGCCAAACTATGCCGA
AGCGTTTTTAGGCCGCGTCACACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCG
TTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCTGATCACCTGAAAATCACCTTCCGCGTGGTGGATGACAAA
AACAAGAAGCTAAAAGAAGGGCGCTCTCTACAAGATCTGAAAGATGCGCTGAAAGGCAAAGTGCAGGAAACGCTGTCTGC
GGTGGCGGATGACGGTATCGAGCAGAGCGGCTTACATATCTGGAGTTTTGGTCAGCTGCCGGAAAGCTACGAACAGAAGC
GTGGTAACTACAAAGTGAAGGCGTGGCCGGCGCTGGTGGATGAACGCGACAGCGTGGCGATCAAACTGTTTGATAATCCG
CTGGAACAAAAGCAGGCAATGTGGAACGGTCTTCGCCGTCTACTGCTGCTGAATATTCCGTCGCCAATCAAATATTTGCA
TGAGAAGTTGCCAAACAAAGCCAAACTTGGGCTGTACTTTAACCCGTATGGCAAAGTGCTGGAGCTGATCGACGACTGTA
TCTCCTGCGGGGTGGATCAACTGATCGACGCCAATGGTGGCCCGGTCTGGACGGAAGAAGGCTTTGCTGCGCTGCATGAG
AAAGTGCGTGCCGAACTGAACGACACGGTGGTGGATATTGCGAAGCAGGTCGAGCAAATTCTTACGGCAGTGTTCAATAT
CAACAAACGTCTGAAAGGGCGGGTGGATATGACCATGGCGCTGGGGCTTTCTGACATTAAAGCGCAGATGGGCGGGTTGG
TGTATCGCGGTTTTGTCACTGGCAACGGTTTTAAACGGCTGGGCGACACGCTACGTTATTTGCAGGCGATTGAAAAACGA
CTGGAAAAACTGGCGGTTGACCCGCATCGTGACCGTGCTCAGATGCTGAAAGTCGAAAACGTCCAGCAGGCGTGGCAGCA
ATGGATCAACAAACTGCCGCCCGCACGTCGTGAGGATGAAGACGTGAAAGAGATCCGTTGGATGATAGAAGAGTTGCGCG
TTAGTTACTTCGCTCAACAACTTGGTACGCCTTATCCGATTTCAGATAAGCGTATTTTGCAGGCGATGGAGCAGATTAGC
GGTTAA

Upstream 100 bases:

>100_bases
TTTAAAAGAAAATTAATCAGGCAGCCTACTGCCCACTAACGTTATGACAGAACAACAAAAATTGACCTTTACGGCCTTGC
AGCAGCGGCTGGATTCGCTG

Downstream 100 bases:

>100_bases
CACTGCTATTTGCCTGATAAATCTAAAACCCGGTAAGCATTTAGCGCCGGGTTTTTTATTAATTCTAAAAACGGTATGGG
AAAAAATTCAGGAGTTCAGA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1281; Mature: 1281

Protein sequence:

>1281_residues
MLRDRQRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILDAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDEALFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G

Sequences:

>Translated_1281_residues
MLRDRQRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILDAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDEALFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G
>Mature_1281_residues
MLRDRQRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILDAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDEALFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=638, Percent_Identity=37.6175548589342, Blast_Score=421, Evalue=1e-117,
Organism=Homo sapiens, GI68509926, Length=644, Percent_Identity=35.8695652173913, Blast_Score=409, Evalue=1e-113,
Organism=Homo sapiens, GI255982614, Length=646, Percent_Identity=35.4489164086687, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI256000749, Length=649, Percent_Identity=35.2850539291217, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI20544129, Length=653, Percent_Identity=34.7626339969372, Blast_Score=387, Evalue=1e-107,
Organism=Homo sapiens, GI20336302, Length=644, Percent_Identity=34.3167701863354, Blast_Score=384, Evalue=1e-106,
Organism=Homo sapiens, GI17999539, Length=684, Percent_Identity=35.8187134502924, Blast_Score=383, Evalue=1e-106,
Organism=Homo sapiens, GI38158022, Length=553, Percent_Identity=35.9855334538879, Blast_Score=355, Evalue=2e-97,
Organism=Homo sapiens, GI299829255, Length=605, Percent_Identity=34.2148760330578, Blast_Score=352, Evalue=1e-96,
Organism=Homo sapiens, GI261878478, Length=649, Percent_Identity=33.1278890600924, Blast_Score=345, Evalue=1e-94,
Organism=Homo sapiens, GI20336290, Length=514, Percent_Identity=34.8249027237354, Blast_Score=262, Evalue=1e-69,
Organism=Homo sapiens, GI167830433, Length=566, Percent_Identity=31.6254416961131, Blast_Score=261, Evalue=2e-69,
Organism=Homo sapiens, GI20336294, Length=514, Percent_Identity=34.8249027237354, Blast_Score=261, Evalue=3e-69,
Organism=Homo sapiens, GI261878481, Length=599, Percent_Identity=29.7161936560935, Blast_Score=258, Evalue=3e-68,
Organism=Homo sapiens, GI166851804, Length=596, Percent_Identity=31.8791946308725, Blast_Score=256, Evalue=1e-67,
Organism=Homo sapiens, GI167830436, Length=563, Percent_Identity=31.2611012433393, Blast_Score=252, Evalue=2e-66,
Organism=Homo sapiens, GI100913206, Length=648, Percent_Identity=28.858024691358, Blast_Score=231, Evalue=4e-60,
Organism=Homo sapiens, GI20336300, Length=647, Percent_Identity=27.047913446677, Blast_Score=221, Evalue=3e-57,
Organism=Homo sapiens, GI163914394, Length=646, Percent_Identity=26.1609907120743, Blast_Score=192, Evalue=1e-48,
Organism=Homo sapiens, GI29029601, Length=419, Percent_Identity=30.5489260143198, Blast_Score=172, Evalue=2e-42,
Organism=Homo sapiens, GI67782362, Length=202, Percent_Identity=44.0594059405941, Blast_Score=168, Evalue=4e-41,
Organism=Homo sapiens, GI269847874, Length=189, Percent_Identity=40.7407407407407, Blast_Score=149, Evalue=2e-35,
Organism=Homo sapiens, GI39777586, Length=346, Percent_Identity=31.2138728323699, Blast_Score=147, Evalue=6e-35,
Organism=Escherichia coli, GI145693127, Length=1281, Percent_Identity=99.5316159250585, Blast_Score=2621, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=441, Percent_Identity=35.3741496598639, Blast_Score=239, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI17535281, Length=641, Percent_Identity=36.1934477379095, Blast_Score=410, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI17554326, Length=630, Percent_Identity=37.7777777777778, Blast_Score=408, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI25144243, Length=673, Percent_Identity=33.4323922734027, Blast_Score=382, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17531507, Length=641, Percent_Identity=35.4134165366615, Blast_Score=380, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI32565154, Length=643, Percent_Identity=33.9035769828927, Blast_Score=376, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17556386, Length=646, Percent_Identity=35.4489164086687, Blast_Score=367, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI71990212, Length=677, Percent_Identity=32.0531757754801, Blast_Score=347, Evalue=2e-95,
Organism=Caenorhabditis elegans, GI71996313, Length=562, Percent_Identity=34.5195729537367, Blast_Score=295, Evalue=1e-79,
Organism=Caenorhabditis elegans, GI86562256, Length=590, Percent_Identity=27.6271186440678, Blast_Score=181, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17552054, Length=445, Percent_Identity=28.5393258426966, Blast_Score=159, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI17507503, Length=367, Percent_Identity=29.1553133514986, Blast_Score=150, Evalue=6e-36,
Organism=Saccharomyces cerevisiae, GI6320850, Length=635, Percent_Identity=36.3779527559055, Blast_Score=420, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6321318, Length=647, Percent_Identity=36.4760432766615, Blast_Score=413, Evalue=1e-116,
Organism=Saccharomyces cerevisiae, GI6322939, Length=648, Percent_Identity=37.962962962963, Blast_Score=362, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6324338, Length=664, Percent_Identity=34.1867469879518, Blast_Score=344, Evalue=5e-95,
Organism=Saccharomyces cerevisiae, GI6322772, Length=661, Percent_Identity=33.7367624810893, Blast_Score=332, Evalue=2e-91,
Organism=Saccharomyces cerevisiae, GI6323451, Length=594, Percent_Identity=28.6195286195286, Blast_Score=233, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6323776, Length=217, Percent_Identity=41.0138248847926, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI20129977, Length=646, Percent_Identity=37.6160990712074, Blast_Score=410, Evalue=1e-114,
Organism=Drosophila melanogaster, GI19921526, Length=672, Percent_Identity=35.7142857142857, Blast_Score=406, Evalue=1e-113,
Organism=Drosophila melanogaster, GI19921728, Length=643, Percent_Identity=35.303265940902, Blast_Score=405, Evalue=1e-112,
Organism=Drosophila melanogaster, GI18859729, Length=637, Percent_Identity=36.8916797488226, Blast_Score=383, Evalue=1e-106,
Organism=Drosophila melanogaster, GI19920696, Length=646, Percent_Identity=35.9133126934984, Blast_Score=377, Evalue=1e-104,
Organism=Drosophila melanogaster, GI45550174, Length=659, Percent_Identity=34.2943854324734, Blast_Score=364, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24643238, Length=560, Percent_Identity=33.3928571428571, Blast_Score=311, Evalue=1e-84,
Organism=Drosophila melanogaster, GI24585491, Length=615, Percent_Identity=29.7560975609756, Blast_Score=270, Evalue=4e-72,
Organism=Drosophila melanogaster, GI24642763, Length=535, Percent_Identity=31.0280373831776, Blast_Score=237, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24585920, Length=524, Percent_Identity=31.8702290076336, Blast_Score=228, Evalue=2e-59,
Organism=Drosophila melanogaster, GI17136342, Length=525, Percent_Identity=31.6190476190476, Blast_Score=227, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24641942, Length=476, Percent_Identity=31.5126050420168, Blast_Score=226, Evalue=9e-59,
Organism=Drosophila melanogaster, GI17136508, Length=598, Percent_Identity=29.5986622073579, Blast_Score=199, Evalue=1e-50,
Organism=Drosophila melanogaster, GI17136242, Length=235, Percent_Identity=39.1489361702128, Blast_Score=158, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24641139, Length=358, Percent_Identity=28.2122905027933, Blast_Score=135, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 146700; Mature: 146700

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDRQRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQKKQDILDAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCEEEEECH
HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCEEEEEEE
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
HHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
HHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
HHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCC
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCHHHCCCHHHHHCCCCCHHHHHHH
NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEECEEEEEECCCCEECCCCHHH
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDEALFEFY
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECHHHHHHHH
DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
EEEEEECCCCCCCCEEEEECCHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHCCC
PAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCC
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEE
AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
ECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEE
NPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQI
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
HHHHHHHHHHHCCCCCCHHHHCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGTPYPISDKRILQAMEQISG
CCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLRDRQRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPV
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQKKQDILDAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVA
CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHH
NRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHHHCEEEEECH
HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCEEEEEEE
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
HHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHH
VQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
HHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
HHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCCC
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCHHHCCCHHHHHCCCCCHHHHHHH
NLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRL
HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
WGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEECEEEEEECCCCEECCCCHHH
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDEALFEFY
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECHHHHHHHH
DQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEE
RLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV
EEEEEECCCCCCCCEEEEECCHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHCCC
PAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCC
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVK
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEE
AWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
ECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEE
NPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQI
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
HHHHHHHHHHHCCCCCCHHHHCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH
LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGTPYPISDKRILQAMEQISG
CCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]