Click here to switch to the map view.

The map label for this gene is yciS

Identifier: 218699991

GI number: 218699991

Start: 1691163

End: 1691471

Strand: Direct

Name: yciS

Synonym: ECIAI39_1620

Alternate gene names: 218699991

Gene position: 1691163-1691471 (Clockwise)

Preceding gene: 218699990

Following gene: 218699992

Centisome position: 32.95

GC content: 48.87

Gene sequence:

>309_bases
GTGAAATATTTACTCATTTTCTTACTGGTGTTAGCGATCTTCGTGATTTCGGTTACGTTAGGTGCGCAGAACGATCAACA
GGTGACGTTTAATTATCTGTTAGCGCAAGGGGAGTACCGTATTTCCACATTGTTAGCGGTATTGTTTGCTGCGGGGTTTG
CTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGA
CTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAA

Upstream 100 bases:

>100_bases
TGGATGCCATTTCGCAGACGGCGCGAAAATGGTACTTTAAAGGGCTATTGCGGTAAGTTGACCATAATTTATTCGCTCTA
ACCACATAACGGGAAGTAAT

Downstream 100 bases:

>100_bases
CTTTCTATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCAGAAGTGCGCA
ACAAAACAAGCAAGATGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKR
LENQLSPATDVAVVPHSSAAKE

Sequences:

>Translated_102_residues
MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKR
LENQLSPATDVAVVPHSSAAKE
>Mature_102_residues
MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKR
LENQLSPATDVAVVPHSSAAKE

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222

Homologues:

Organism=Escherichia coli, GI1787535, Length=102, Percent_Identity=100, Blast_Score=205, Evalue=5e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCIS_ECOLI (P0ACV4)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   B64876
- RefSeq:   AP_001905.1
- RefSeq:   NP_415795.1
- ProteinModelPortal:   P0ACV4
- DIP:   DIP-47880N
- STRING:   P0ACV4
- EnsemblBacteria:   EBESCT00000002937
- EnsemblBacteria:   EBESCT00000017831
- GeneID:   944936
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1271
- KEGG:   eco:b1279
- EchoBASE:   EB3663
- EcoGene:   EG13904
- eggNOG:   COG3771
- GeneTree:   EBGT00050000011465
- HOGENOM:   HBG742058
- OMA:   WLITAFF
- ProtClustDB:   CLSK880128
- BioCyc:   EcoCyc:G6637-MONOMER
- Genevestigator:   P0ACV4
- InterPro:   IPR010445

Pfam domain/function: PF06305 DUF1049

EC number: NA

Molecular weight: Translated: 11352; Mature: 11352

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x2231b024)-; HASH(0x22334850)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLIC
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCH
>Mature Secondary Structure
MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLIC
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
GLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503