Definition | Escherichia coli IAI39 chromosome, complete genome. |
---|---|
Accession | NC_011750 |
Length | 5,132,068 |
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The map label for this gene is torZ
Identifier: 218699556
GI number: 218699556
Start: 1246994
End: 1249423
Strand: Direct
Name: torZ
Synonym: ECIAI39_1177
Alternate gene names: 218699556
Gene position: 1246994-1249423 (Clockwise)
Preceding gene: 218699555
Following gene: 218699562
Centisome position: 24.3
GC content: 51.85
Gene sequence:
>2430_bases ATGACATTAACAAGACGTGAATTTATTAAACACAGCGGTATTGCCGCTGGGGCGCTGGTGGTGACATCGGCTGCACCGCT ACCCGCATGGGCAGAAGAGAAGGGGGGCAAAATCCTCACCGCGGGCCGTTGGGGAGCGATGAACGTAGAAGTGAAGGACG GCAAGATTGTTTCTTCGACAGGCGCGCTGGCGAAAACCATACCGAACTCCTTACAGTCTACGGCGGCGGATCAGGTACAC ACCACGGCGCGTATTCAGCATCCGATGGTGAGAAAAAGCTATCTCGATAATCCACTACAACCGGCGAAAGGTCGTGGCGA AGATACCTATGTACAGGTGAGCTGGGAACAAGCATTAAAACTGATTCATGAGCAACACGATCGTATTCGTAAAGCTAACG GACCATCGGCCATTTTTGCTGGATCGTACGGCTGGCGCTCTTCTGGCGTGTTGCATAAAGCGCAAACCTTACTGCAACGT TATATGAATCTGGCGGGGGGATATTCCGGGCATAGTGGCGATTATTCTACCGGGGCAGCACAGGTGATCATGCCGCACGT TGTCGGTTCTGTGGAGGTCTATGAACAGCAGACTTCCTGGCCGCTGATTCTGGAAAACAGTCAGGTGGTGGTGTTGTGGG GCATGAACCCGCTGAATACCTTAAAAATTGCCTGGAGCAGTACCGATGAACAAGGGCTGGAATACTTCCATCAGCTGAAA AAATCGGGCAAACCGGTGATTGCCATCGACCCTATCCGTTCCGAAACAATCGAGTTCTTTGGCGATAACGCGACCTGGAT CGCGCCGAATATGGGGACCGACGTGGCGCTGATGTTAGGCATCGCGCATACACTGATGACACAAGGTAAGCACGATAAAG CCTTCCTTGAGAAATACACCACCGGTTATCCGCAGTTTGAAGAGTATCTGACCGGCAAGAACGATAATACGCCGAAGAGT GCGGCCTGGGCGGCAGAAATTACTGGCGTACCGGAAGCGCAGATTGTCAAACTCGCAGAACTGATGGCGGCGAATCGCAC GATGCTGATGGCAGGTTGGGGGATCCAACGCCAGCAATACGGTGAACAGAAACATTGGATGCTGGTGACGCTGGCGGCGA TGTTAGGGCAAATTGGTACACCGGGCGGCGGGTTTGGTTTCTCTTATCATTACTCCAACGGTGGCAACCCGACGCGAGTT GGCGGCGTGCTGCCAGAAATGTCTGCGGCGATTGCCGGACAGGCAAGTGAGGAAGCTGATGATGGCGGAATGACCGCGAT TCCGGTCGCCCGTATTGTCGATGCGCTGGAAAATCCTGGCGGCAAATATCAGCACAACGGTAAAGAGCAAACGTACCCAA ATATCAAAATGATCTGGTGGGCGGGTGGCGGTAACTTTACCCATCACCAGGATACTAATCGTCTGATTAAAGCCTGGCAG AAACCGGAGATGATCGTCGTTTCTGAATGCTACTGGACCGCAGCAGCCAAACACGCAGATATCGTATTACCGATCACCAC ATCGTTTGAGCGCAATGACCTGACGATGACCGGTGATTATAGCAACCAGCATATTGTGCCGATGAAGCAGGCTGTCGCTC CGCAATTTGAAGCGCGTAACGATTTTGATGTGTTTGCCGATCTTGCTGAATTACTCAAACCTGGCGGAAAAGAGATCTAT ACCGAAGGTAAAGATGAAATGGCGTGGCTGAAATTTTTCTATGATGCCGCTCAGAAAGGTGCGCGTGCGCAACGCGTGAC TATGCCGATGTTTAATGCTTTCTGGCAGCAAAATAAACTGATCGAAATGCGCCGCAGCGAGAAGAACGAGCAATATGTTC GCTATGGTGATTTCCGCGCCGATCCGGTGAAAAATGCGCTGGGTACGCCAAGCGGCAAAATTGAGATTTACTCCAAAACG CTGGAAAAATTTGGCTATAAGGATTGCCCGGCACACCCAACCTGGCTTGCGCCTGATGAGTGGAAAGGTTCCGCCGACGA GAAGCAGTTGCAGCTTCTGACCGCACATCCGGCACATCGTTTACACAGTCAGCTTAACTATGCGGAACTGCGTAAAAAAT ATGCGGTTGCCGATCGTGAACCGATCACTATTCACACCGAAGATGCTGCTCGCTTTGGTATTGCGAATGGCGATCTGGTG CGTGTCTGGAACAAACGTGGTCAGATTCTGACAGGCGCGGTGGTGACTGACGGGATCAAAAAAGGCGTGGTATGCGTGCA TGAAGGTGCATGGCCAGATCTGGAAAATGGCTTATGTAAAAACGGCAGTGCGAACGTGTTAACGGCGGATATCCCCAGCT CTCAGCTGGCAAATGCCTGTGCCGGTAACTCTGCGCTGGTGTATATCGAAAAATATACGGGCAATGCACCGAAGTTAACG GCGTTTGATCAGCCAGCTGTTCAGGCATAA
Upstream 100 bases:
>100_bases CATGAGCGAAAACGAACTGGACATTTTGACGCGGTACTTCCAGTACAACGCCAAAGATATTACCGAGAAACAGTGATCCT CGTTGATCAGGGAGGAAGTT
Downstream 100 bases:
>100_bases GACGTGAAAAGCGCCCGGAAACGGGCGCTAATCTTTACGGCTTGCGCGCAATCAGCACCGCGCGTTTAGGTGCCGGATAA CCTTCAACTGTCTTACTCGG
Product: trimethylamine N-oxide reductase system III, catalytic subunit
Products: NA
Alternate protein names: TMAO reductase 2; Trimethylamine oxidase 2 [H]
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVH TTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQR YMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLK KSGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKAFLEKYTTGYPQFEEYLTGKNDNTPKS AAWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRV GGVLPEMSAAIAGQASEEADDGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQ KPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIY TEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRRSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKT LEKFGYKDCPAHPTWLAPDEWKGSADEKQLQLLTAHPAHRLHSQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLV RVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANACAGNSALVYIEKYTGNAPKLT AFDQPAVQA
Sequences:
>Translated_809_residues MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVH TTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQR YMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLK KSGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKAFLEKYTTGYPQFEEYLTGKNDNTPKS AAWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRV GGVLPEMSAAIAGQASEEADDGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQ KPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIY TEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRRSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKT LEKFGYKDCPAHPTWLAPDEWKGSADEKQLQLLTAHPAHRLHSQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLV RVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANACAGNSALVYIEKYTGNAPKLT AFDQPAVQA >Mature_808_residues TLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHT TARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRY MNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKK SGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKAFLEKYTTGYPQFEEYLTGKNDNTPKSA AWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVG GVLPEMSAAIAGQASEEADDGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQK PEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIYT EGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRRSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKTL EKFGYKDCPAHPTWLAPDEWKGSADEKQLQLLTAHPAHRLHSQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLVR VWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANACAGNSALVYIEKYTGNAPKLTA FDQPAVQA
Specific function: Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. Can also reduce other N- and S-oxide compounds such as 4-methylmorpholine-N-oxide and biotin sulfoxide (BSO), but with a lower catalytic
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=809, Percent_Identity=98.8875154511743, Blast_Score=1667, Evalue=0.0, Organism=Escherichia coli, GI145693196, Length=773, Percent_Identity=63.6481241914618, Blast_Score=1064, Evalue=0.0, Organism=Escherichia coli, GI1787231, Length=786, Percent_Identity=45.5470737913486, Blast_Score=653, Evalue=0.0, Organism=Escherichia coli, GI87081797, Length=752, Percent_Identity=31.3829787234043, Blast_Score=276, Evalue=3e-75, Organism=Escherichia coli, GI1787870, Length=848, Percent_Identity=29.0094339622642, Blast_Score=270, Evalue=3e-73, Organism=Escherichia coli, GI171474008, Length=840, Percent_Identity=28.5714285714286, Blast_Score=239, Evalue=5e-64, Organism=Escherichia coli, GI3868721, Length=719, Percent_Identity=23.2267037552156, Blast_Score=113, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.2.3 [H]
Molecular weight: Translated: 88918; Mature: 88787
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSST CCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHCCCEEEEECCCCEEEEEECCCEEEECC GALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALK CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH LIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAA HHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH QVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLK HHHHHHHHCCEEEEECCCCCCEEEECCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHH KSGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKAFLEKYT HCCCCEEEECCCCCHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC TGYPQFEEYLTGKNDNTPKSAAWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQY CCCCCHHHHHCCCCCCCCCCHHEEHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHH GEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVGGVLPEMSAAIAGQASEEAD CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCC DGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQ CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHC KPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARN CCCEEEEECCHHHHHCCCCEEEEEEECCCCCCCCEEECCCCCCEECCHHHHHCCCCCCCC DFDVFADLAELLKPGGKEIYTEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKL CHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCHH IEMRRSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDE HHHHHCCCCCCEEEECCCCCCHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCC WKGSADEKQLQLLTAHPAHRLHSQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLV CCCCCCHHHEEEEECCCHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCEE RVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANAC EEECCCCCEEEEHHHHCCHHCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH AGNSALVYIEKYTGNAPKLTAFDQPAVQA CCCCEEEEEEECCCCCCCEEECCCCCCCC >Mature Secondary Structure TLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSST CCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHCCCEEEEECCCCEEEEEECCCEEEECC GALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALK CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH LIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAA HHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH QVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLK HHHHHHHHCCEEEEECCCCCCEEEECCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHH KSGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKAFLEKYT HCCCCEEEECCCCCHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC TGYPQFEEYLTGKNDNTPKSAAWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQY CCCCCHHHHHCCCCCCCCCCHHEEHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHH GEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVGGVLPEMSAAIAGQASEEAD CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCC DGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQ CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHC KPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARN CCCEEEEECCHHHHHCCCCEEEEEEECCCCCCCCEEECCCCCCEECCHHHHHCCCCCCCC DFDVFADLAELLKPGGKEIYTEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKL CHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCHH IEMRRSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDE HHHHHCCCCCCEEEECCCCCCHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCC WKGSADEKQLQLLTAHPAHRLHSQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLV CCCCCCHHHEEEEECCCHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCEE RVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANAC EEECCCCCEEEEHHHHCCHHCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH AGNSALVYIEKYTGNAPKLTAFDQPAVQA CCCCEEEEEEECCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]