Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218698022
Identifier: 218698022
GI number: 218698022
Start: 4949069
End: 4950718
Strand: Direct
Name: 218698022
Synonym: EC55989_4832
Alternate gene names: NA
Gene position: 4949069-4950718 (Clockwise)
Preceding gene: 218698019
Following gene: 218698023
Centisome position: 96.01
GC content: 41.88
Gene sequence:
>1650_bases ATGAGCGCAATCACATTACGTAAAGCGTTGGGTGTACTTGCGAAGTCATCTTCGTTTTCCGTAACCACGGTAACGCATCG TCAAAAGGATGAGTTCGATCAGTTAAAAGAACAACTCTTTGTTAAACAAGAAATTGAAACTGAGCTGCAACGTTATCTGG ATGTTGCTAAGCCCGGTGAAATCATCTTTTTGTGTGGCAGTAGTGGTGATGGAAAGTCCGAAATTTTGACCCGTTGTAAG TCAAACCCTCGTTATCAGCAGCGCTTTAGTTTTCATCTGGATGCAACACACAGCTTTGCTCCCCGGCAATCAGCTATTGA TGCTTTAAATGATTTATTTAGCAATCATCACCAATACTCATCTCCTTTGCTTATAGGCATCAATACCGGGATGCTCGCCA ATTTTGCCAGAGAAGGTGCTGAATGCCATCTGGCGATCCGCACTGCGATCGATTCTTTCTTGTCAGCAGATCAGGAAGAA AGCCGCCCATACCGCAGTGGGCATTGTTCTTTTTTTGACTTTGAGCATTACCCTAAATTCCAGTTTAATGAAAAAAAACA GTATTCATCGTTTATTAAAACATTACTGGATAATTTAACCCGTAATGATGATAGTAATTTGTTTCAGTTTATTTTTCGAC ATGATGAGACCGTTAACCCTGAGCTGAAAGAAGTTGCTAACTATAAATTACTTTGTCTGCCGGGTGTTCAGGATGTTCTC ATCACTCAGCTCTTTAAGGCCCGCCTGATTAAAGATCAGTTTGTGACAACCCGAACTCTACTGGATTTTCTGCATCATTT GCTTATGGGGCCGGGGTATTTATTTGATAATCTTTTCACTGGGGCAGAAAACGACCTGATTAAAAAAGTTTCTGATTTTG ATCCTGCTAGGCTGCACACCTATGAAATCGATCAGTTTATTTTGCGCTACGAATTGGGCCTGGTTGACCCTGAACTGGAT GATTTTTTAGCTGCACTCGCGCCATTACACATTAGATTTGATCGCCAGTGCGTTAATCCGGGTGATGCGGCTTCATTAAT TCGGCTCTTCTGGTTGCTGCAGGATGAATCTCTGGGGAATAATTATCATCAGAAATTTTCCGTATTCTTCAATGAATCTT TATTTGAGCATTATTCAGAAATCTGGCATCTGCACAAAAATTACATCGCTGACTCAGAGCAGAAAAAAGCACTGAACCGG TTTTATACATCCGAACTTATTGCTGGTATTCAGCGCTATGCAAACCGCAAAGCGCCGGAATTGAGTATGCAAAAAGAAGA GTTCTTTTTAGGTGAATATGGTGGGGTAAAAATAACCGCGCCAGTCGAATTGAAACCTGACTGGGAGGCCATCCGCAATA AAAATACGGCCCACCCTACTGGCTTCGACGTGCATTTAAAAGTTGGGCAAAACTCTCTGTTACCAGTTCGTATCGGACTT AATTTATTTGAACTTTTGAACAAATTAAACAATGGCTATCGCCCCAATAAATACGATAAAAATGCCATTGTTCTACTGGA CGAAATCGTTGATTTGATTACTGAACAGGCCAAATCCAGCAGCGAAATCAAGTTTTATGCTGGTGGGCGGCGAGTTTATC GCGCTAAAGCGGACGACGACATGATCACCATTAGCGGTATGGAGGGTTAG
Upstream 100 bases:
>100_bases ATTTTAAAATTGCCCGTAATAAATGTCTCAAAGTGCCTATAGATATCAGCGGATAGCTTTTATAGAATAGGTATAATCCT ACTTTTGAGAACATGAAGTT
Downstream 100 bases:
>100_bases TGGAATGTACCCTATCGCAACGACGTTAAAAGTAGGTAATAATCAACTGGATAGTTATCTGCCGATACGTAACAAAAACA ATGATATTAACTGGCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MSAITLRKALGVLAKSSSFSVTTVTHRQKDEFDQLKEQLFVKQEIETELQRYLDVAKPGEIIFLCGSSGDGKSEILTRCK SNPRYQQRFSFHLDATHSFAPRQSAIDALNDLFSNHHQYSSPLLIGINTGMLANFAREGAECHLAIRTAIDSFLSADQEE SRPYRSGHCSFFDFEHYPKFQFNEKKQYSSFIKTLLDNLTRNDDSNLFQFIFRHDETVNPELKEVANYKLLCLPGVQDVL ITQLFKARLIKDQFVTTRTLLDFLHHLLMGPGYLFDNLFTGAENDLIKKVSDFDPARLHTYEIDQFILRYELGLVDPELD DFLAALAPLHIRFDRQCVNPGDAASLIRLFWLLQDESLGNNYHQKFSVFFNESLFEHYSEIWHLHKNYIADSEQKKALNR FYTSELIAGIQRYANRKAPELSMQKEEFFLGEYGGVKITAPVELKPDWEAIRNKNTAHPTGFDVHLKVGQNSLLPVRIGL NLFELLNKLNNGYRPNKYDKNAIVLLDEIVDLITEQAKSSSEIKFYAGGRRVYRAKADDDMITISGMEG
Sequences:
>Translated_549_residues MSAITLRKALGVLAKSSSFSVTTVTHRQKDEFDQLKEQLFVKQEIETELQRYLDVAKPGEIIFLCGSSGDGKSEILTRCK SNPRYQQRFSFHLDATHSFAPRQSAIDALNDLFSNHHQYSSPLLIGINTGMLANFAREGAECHLAIRTAIDSFLSADQEE SRPYRSGHCSFFDFEHYPKFQFNEKKQYSSFIKTLLDNLTRNDDSNLFQFIFRHDETVNPELKEVANYKLLCLPGVQDVL ITQLFKARLIKDQFVTTRTLLDFLHHLLMGPGYLFDNLFTGAENDLIKKVSDFDPARLHTYEIDQFILRYELGLVDPELD DFLAALAPLHIRFDRQCVNPGDAASLIRLFWLLQDESLGNNYHQKFSVFFNESLFEHYSEIWHLHKNYIADSEQKKALNR FYTSELIAGIQRYANRKAPELSMQKEEFFLGEYGGVKITAPVELKPDWEAIRNKNTAHPTGFDVHLKVGQNSLLPVRIGL NLFELLNKLNNGYRPNKYDKNAIVLLDEIVDLITEQAKSSSEIKFYAGGRRVYRAKADDDMITISGMEG >Mature_548_residues SAITLRKALGVLAKSSSFSVTTVTHRQKDEFDQLKEQLFVKQEIETELQRYLDVAKPGEIIFLCGSSGDGKSEILTRCKS NPRYQQRFSFHLDATHSFAPRQSAIDALNDLFSNHHQYSSPLLIGINTGMLANFAREGAECHLAIRTAIDSFLSADQEES RPYRSGHCSFFDFEHYPKFQFNEKKQYSSFIKTLLDNLTRNDDSNLFQFIFRHDETVNPELKEVANYKLLCLPGVQDVLI TQLFKARLIKDQFVTTRTLLDFLHHLLMGPGYLFDNLFTGAENDLIKKVSDFDPARLHTYEIDQFILRYELGLVDPELDD FLAALAPLHIRFDRQCVNPGDAASLIRLFWLLQDESLGNNYHQKFSVFFNESLFEHYSEIWHLHKNYIADSEQKKALNRF YTSELIAGIQRYANRKAPELSMQKEEFFLGEYGGVKITAPVELKPDWEAIRNKNTAHPTGFDVHLKVGQNSLLPVRIGLN LFELLNKLNNGYRPNKYDKNAIVLLDEIVDLITEQAKSSSEIKFYAGGRRVYRAKADDDMITISGMEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63061; Mature: 62930
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAITLRKALGVLAKSSSFSVTTVTHRQKDEFDQLKEQLFVKQEIETELQRYLDVAKPGE CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IIFLCGSSGDGKSEILTRCKSNPRYQQRFSFHLDATHSFAPRQSAIDALNDLFSNHHQYS EEEEECCCCCCHHHHHHHHCCCCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC SPLLIGINTGMLANFAREGAECHLAIRTAIDSFLSADQEESRPYRSGHCSFFDFEHYPKF CCEEEEECCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHCCCCCCCCCCEEECCCCCCC QFNEKKQYSSFIKTLLDNLTRNDDSNLFQFIFRHDETVNPELKEVANYKLLCLPGVQDVL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCHHHHH ITQLFKARLIKDQFVTTRTLLDFLHHLLMGPGYLFDNLFTGAENDLIKKVSDFDPARLHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEH YEIDQFILRYELGLVDPELDDFLAALAPLHIRFDRQCVNPGDAASLIRLFWLLQDESLGN HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCC NYHQKFSVFFNESLFEHYSEIWHLHKNYIADSEQKKALNRFYTSELIAGIQRYANRKAPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC LSMQKEEFFLGEYGGVKITAPVELKPDWEAIRNKNTAHPTGFDVHLKVGQNSLLPVRIGL CCCCHHHHHEECCCCEEEEECEEECCCHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECC NLFELLNKLNNGYRPNKYDKNAIVLLDEIVDLITEQAKSSSEIKFYAGGRRVYRAKADDD HHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCC MITISGMEG EEEEECCCC >Mature Secondary Structure SAITLRKALGVLAKSSSFSVTTVTHRQKDEFDQLKEQLFVKQEIETELQRYLDVAKPGE CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IIFLCGSSGDGKSEILTRCKSNPRYQQRFSFHLDATHSFAPRQSAIDALNDLFSNHHQYS EEEEECCCCCCHHHHHHHHCCCCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC SPLLIGINTGMLANFAREGAECHLAIRTAIDSFLSADQEESRPYRSGHCSFFDFEHYPKF CCEEEEECCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHCCCCCCCCCCEEECCCCCCC QFNEKKQYSSFIKTLLDNLTRNDDSNLFQFIFRHDETVNPELKEVANYKLLCLPGVQDVL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCHHHHH ITQLFKARLIKDQFVTTRTLLDFLHHLLMGPGYLFDNLFTGAENDLIKKVSDFDPARLHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEH YEIDQFILRYELGLVDPELDDFLAALAPLHIRFDRQCVNPGDAASLIRLFWLLQDESLGN HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCC NYHQKFSVFFNESLFEHYSEIWHLHKNYIADSEQKKALNRFYTSELIAGIQRYANRKAPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC LSMQKEEFFLGEYGGVKITAPVELKPDWEAIRNKNTAHPTGFDVHLKVGQNSLLPVRIGL CCCCHHHHHEECCCCEEEEECEEECCCHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECC NLFELLNKLNNGYRPNKYDKNAIVLLDEIVDLITEQAKSSSEIKFYAGGRRVYRAKADDD HHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCC MITISGMEG EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA