Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218698023
Identifier: 218698023
GI number: 218698023
Start: 4950723
End: 4952048
Strand: Direct
Name: 218698023
Synonym: EC55989_4833
Alternate gene names: NA
Gene position: 4950723-4952048 (Clockwise)
Preceding gene: 218698022
Following gene: 218698024
Centisome position: 96.04
GC content: 42.76
Gene sequence:
>1326_bases ATGTACCCTATCGCAACGACGTTAAAAGTAGGTAATAATCAACTGGATAGTTATCTGCCGATACGTAACAAAAACAATGA TATTAACTGGCAATTTGTCACCGGATTGGTGCTTAGCTACGCCCTGAAGCGTAAAATTGATGCCTATACTCCCAGTCAAT TTCGCGATGATTGCAAGGCTCATTTGCAAGAATTGCTTGATGAACCAGCATTCTGGACTGTACTGGAACGGATGTATTTT TCCAGTGAAGATATCTTTCGTGTATCTCCGCTTTTTTTACTATTTCATGCTCAGTTTGATGGCGAAAAAATAAGTGGCGC TTCAATGGCCGATAAACGCCTTGGCACTCTGTTTGCTAATCTAATGGGAGATTTCAGCTTGGAATATCCTATCCAGGATA AGCTGAACTTCATTGAGCAGCAAATGCTAAATAAGCTCAATGAAAAAATAAAGTTATTGGGAAAAGGCCCATTCTCTGAA GAACAACCCTACCTTCCCTATCTGGTGACTTGTTTTCAGTCTGATCTGGCGTTTTTGGCAGAACACCCTCAATATTTGTT ACAAGAACTGACTAATACTCTGCGTTTATATGCCTTTAGCTGGTGTGCCCAGCTAGCGCTCAATCTGGACAACTGGCAGG ACGGCGAGCCACAAAGTAAGTCGCTTTTCTTTATTCTCGACACTGAAAAAGCCAGTTCTGAACGGGATCAAATAAAACGC TTTGGTTATAAGTGGTTCGCTCGTCAAAGTGAAAAACTTTTCCCAATACTCTCCGCGCTGGAAGTTCTACAAATAAAAGG AGATAAGAAGCGTCCACTCTGGCAGGTCTATCAGGATTGCTTAAATTTTTCTGATAACTCATCTCAATTACTGCAAGATC TCAATAATTATTTGCAGGAGTTTATCGAAAAACGCGAGCTTTCGGCATCGAAGTATACGCAAGCCGTTACGCTGGAAGAA GCTTTTAAACAATTATTAACCGTTGCTGTTGAACAGTTTCAGGATAAGAAATCTGATCGTGCGACAGTTAACCGGAAATA CATCAACGAGCTTGAAACCCAGATCTGCACCGATTTCATTCAGGTACGTGGTCGGGCGGGAAAAGTACTGGTACTGAATC AGGATCGTCTGCTGCTGCTGACCAATCTCACTGTGGGTAAAAATGACAAACTACGCCTGCATGAGTTGCTGCGCGGCTTT GAACAGCGCGGATTTTATCTGGATAACCAGTCGGCACAAACGCTGGTAGCGTTTTATGAACGTATGGGAAATGTGGAGCG AATGAGTGACAGTGGAGACGCCGTGTATGTCCGTAAAACAGTATGA
Upstream 100 bases:
>100_bases TCCAGCAGCGAAATCAAGTTTTATGCTGGTGGGCGGCGAGTTTATCGCGCTAAAGCGGACGACGACATGATCACCATTAG CGGTATGGAGGGTTAGTGGA
Downstream 100 bases:
>100_bases AACCTATCTGGCGGAAACCTTTATTGAATGGGTTAGTGGCATTATTCAACCTGGTGAGCGTTACCAGTTTAAATCTCCTG ACCCTGACAATGCTCTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MYPIATTLKVGNNQLDSYLPIRNKNNDINWQFVTGLVLSYALKRKIDAYTPSQFRDDCKAHLQELLDEPAFWTVLERMYF SSEDIFRVSPLFLLFHAQFDGEKISGASMADKRLGTLFANLMGDFSLEYPIQDKLNFIEQQMLNKLNEKIKLLGKGPFSE EQPYLPYLVTCFQSDLAFLAEHPQYLLQELTNTLRLYAFSWCAQLALNLDNWQDGEPQSKSLFFILDTEKASSERDQIKR FGYKWFARQSEKLFPILSALEVLQIKGDKKRPLWQVYQDCLNFSDNSSQLLQDLNNYLQEFIEKRELSASKYTQAVTLEE AFKQLLTVAVEQFQDKKSDRATVNRKYINELETQICTDFIQVRGRAGKVLVLNQDRLLLLTNLTVGKNDKLRLHELLRGF EQRGFYLDNQSAQTLVAFYERMGNVERMSDSGDAVYVRKTV
Sequences:
>Translated_441_residues MYPIATTLKVGNNQLDSYLPIRNKNNDINWQFVTGLVLSYALKRKIDAYTPSQFRDDCKAHLQELLDEPAFWTVLERMYF SSEDIFRVSPLFLLFHAQFDGEKISGASMADKRLGTLFANLMGDFSLEYPIQDKLNFIEQQMLNKLNEKIKLLGKGPFSE EQPYLPYLVTCFQSDLAFLAEHPQYLLQELTNTLRLYAFSWCAQLALNLDNWQDGEPQSKSLFFILDTEKASSERDQIKR FGYKWFARQSEKLFPILSALEVLQIKGDKKRPLWQVYQDCLNFSDNSSQLLQDLNNYLQEFIEKRELSASKYTQAVTLEE AFKQLLTVAVEQFQDKKSDRATVNRKYINELETQICTDFIQVRGRAGKVLVLNQDRLLLLTNLTVGKNDKLRLHELLRGF EQRGFYLDNQSAQTLVAFYERMGNVERMSDSGDAVYVRKTV >Mature_441_residues MYPIATTLKVGNNQLDSYLPIRNKNNDINWQFVTGLVLSYALKRKIDAYTPSQFRDDCKAHLQELLDEPAFWTVLERMYF SSEDIFRVSPLFLLFHAQFDGEKISGASMADKRLGTLFANLMGDFSLEYPIQDKLNFIEQQMLNKLNEKIKLLGKGPFSE EQPYLPYLVTCFQSDLAFLAEHPQYLLQELTNTLRLYAFSWCAQLALNLDNWQDGEPQSKSLFFILDTEKASSERDQIKR FGYKWFARQSEKLFPILSALEVLQIKGDKKRPLWQVYQDCLNFSDNSSQLLQDLNNYLQEFIEKRELSASKYTQAVTLEE AFKQLLTVAVEQFQDKKSDRATVNRKYINELETQICTDFIQVRGRAGKVLVLNQDRLLLLTNLTVGKNDKLRLHELLRGF EQRGFYLDNQSAQTLVAFYERMGNVERMSDSGDAVYVRKTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51306; Mature: 51306
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPIATTLKVGNNQLDSYLPIRNKNNDINWQFVTGLVLSYALKRKIDAYTPSQFRDDCKA CCCCCEEEECCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HLQELLDEPAFWTVLERMYFSSEDIFRVSPLFLLFHAQFDGEKISGASMADKRLGTLFAN HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHH LMGDFSLEYPIQDKLNFIEQQMLNKLNEKIKLLGKGPFSEEQPYLPYLVTCFQSDLAFLA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH EHPQYLLQELTNTLRLYAFSWCAQLALNLDNWQDGEPQSKSLFFILDTEKASSERDQIKR HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHH FGYKWFARQSEKLFPILSALEVLQIKGDKKRPLWQVYQDCLNFSDNSSQLLQDLNNYLQE HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH FIEKRELSASKYTQAVTLEEAFKQLLTVAVEQFQDKKSDRATVNRKYINELETQICTDFI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QVRGRAGKVLVLNQDRLLLLTNLTVGKNDKLRLHELLRGFEQRGFYLDNQSAQTLVAFYE HHCCCCCEEEEECCCCEEEEEECEECCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHH RMGNVERMSDSGDAVYVRKTV HHCCHHHCCCCCCEEEEEECC >Mature Secondary Structure MYPIATTLKVGNNQLDSYLPIRNKNNDINWQFVTGLVLSYALKRKIDAYTPSQFRDDCKA CCCCCEEEECCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HLQELLDEPAFWTVLERMYFSSEDIFRVSPLFLLFHAQFDGEKISGASMADKRLGTLFAN HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHH LMGDFSLEYPIQDKLNFIEQQMLNKLNEKIKLLGKGPFSEEQPYLPYLVTCFQSDLAFLA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH EHPQYLLQELTNTLRLYAFSWCAQLALNLDNWQDGEPQSKSLFFILDTEKASSERDQIKR HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHH FGYKWFARQSEKLFPILSALEVLQIKGDKKRPLWQVYQDCLNFSDNSSQLLQDLNNYLQE HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH FIEKRELSASKYTQAVTLEEAFKQLLTVAVEQFQDKKSDRATVNRKYINELETQICTDFI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QVRGRAGKVLVLNQDRLLLLTNLTVGKNDKLRLHELLRGFEQRGFYLDNQSAQTLVAFYE HHCCCCCEEEEECCCCEEEEEECEECCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHH RMGNVERMSDSGDAVYVRKTV HHCCHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA