Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is bisC
Identifier: 218697268
GI number: 218697268
Start: 4086038
End: 4088317
Strand: Reverse
Name: bisC
Synonym: EC55989_4007
Alternate gene names: 218697268
Gene position: 4088317-4086038 (Counterclockwise)
Preceding gene: 218697271
Following gene: 218697265
Centisome position: 79.31
GC content: 54.12
Gene sequence:
>2280_bases ATGCTGGTTGAAACCGACGGCGAAACCGTGTTTAGCTCGCATGGCGCGTTAGCCACAGGAATGGAAAACTCCTTGCAGAG CGCGGTTCGCGACCAGGTTCACAGCAATACACGGGTACGATTTCCAATGGTGCGCAAAGGCTTTCTTGCGTCACCGGAAA ATCCGCAAGGCATTCGTGGGCAGGATGAATTTGTTCGCGTGAGTTGGGATGAGGCGCTGGATCTTATTCACCAACAACAT AAACGCATTCGTGAGGCTTATGGTCCGGCATCGATTTTTGCTGGTTCCTACGGCTGGCGTTCAAACGGCGTGCTGCATAA GGCCTCGACATTATTACAACGCTATATGGCGCTGGCAGGCGGTTATACCGGGCATCTGGGGGATTATTCGACCGGCGCGG CACAGGCGATCATGCCGTATGTCGTGGGTGGTAGCGAAGTTTATCAACAGCAAACCAGTTGGCCGCTGGTGCTGGAACAT AGCGATGTCGTGGTGTTGTGGAGTGCTAACCCACTCAATACGCTGAAAATTGCGTGGAATGCATCTGATGAGCAGGGGCT TTCTTACTTTTCCGCACTGCGTGACAGCGGGAAAAAGCTGATCTGTATTGATCCAATGCGATCGGAAACCGTCGATTTCT TTGGCGATAAAATGGAGTGGGTGGCACCGCACATGGGCACCGATGTTGCGCTGATGCTGGGGATCGCCCATACGCTGGTG GAAAATGGTTGGCACGACGAAGCGTTTCTGACGCGTTGCACCACAGGTTATGCCGTCTTCGCCTCTTATTTGCTGGGCGA GAGTGACGGAATAGCGAAAAACGCCGAATGGGCGGCAGAGATTTGTGGGGTTAACGCAGCGAAAATCCGCGAGCTGGCGG CTCTTTTCCACCAAAACACGACCATGCTGATGGCTGGCTGGGGAATGCAGCGCCAACAGTTTGGTGAGCAAAAACACTGG ATGATCGTCACGCTGGCGGCAATGTTGGGGCAAATCGGCACACCCGGCGGCGGTTTTGGTCTTTCTTATCATTTTGCCAA TGGTGGTAACCCCACGCGGCGTTCTGCGGTGCTCTCTTCCATGCAGGGCAGCTTGCCGGGTGGCTGCGATGCGGTGGATA AAATCCCTGTTGCCCGCATTGTTGAAGCACTGGAAAACCCTGGTGGCGCATATCAACACAACGGTATGAACCGACATTTC CCGGATATTCGTTTTATCTGGTGGGCGGGCGGTGCCAACTTTACTCATCATCAGGATACCAATCGTCTGATCCGTGCCTG GCAAAAACCGGAGCTGGTGGTGATCTCTGAATGCTTCTGGACGGCGGCGGCGAAACACGCGGATATCGTTCTGCCTGCGA CTACCTCTTTTGAGCGTAATGATCTCACCATGACCGGTGATTACAGTAATCAGCATCTGGTGCCGATGAAGCAAGTGGTG CCGCCACGCTATGAAGCGCGTAATGATTTTGATGTTTTTGCCGAGTTAAGTGAACGCTGGGAGAAGGGCGGTTATGCACG TTTTACGGAAGGAAAAAGTGAGCTGCAATGGCTGGAAACGTTTTATAACGTTGCCCGGCAGCGCGGGGCAAGCCAGCAGG TTGAATTGCCGCCATTTGCTGAGTTCTGGCAAGCCAACCAGTTAATTGAGATGCCGGAAAACCCGGACAGCGAGCGGTTT ATTCGCTTCGCTGATTTTTGCCGCGATCCGCTGGCGCATCCGTTAAAAACCGCCAGCGGCAAGATTGAAATCTTCTCACA GCGTATTGCCGATTACGGTTACCCGGATTGCCCTGGGCATCCAATGTGGCTGGAGCCGGACGAATGGCAGGGCAATGCCG AACCAGAACAGTTGCAGGTACTTTCTGCCCATCCGGCGCACCGCCTGCACAGCCAGCTGAATTACAGTTCTCTGCGCGAA TTGTACGCGGTAGCAAACCGTGAGCCTGTCACCATTCATCCTGACGATGCTCAGGCGCGCGGCATTCAAGATGGCGATAC TGTTCGGCTGTGGAACGCACGCGGGCAAATTCTTGCCGGAGCGGTCATTAGCGAGGGAATTAAACCTGGCGTGATTTGTA TTCACGAAGGGGCATGGCCGGATTTGGATTTAACCGCTGACGGTATTTGTAAAAACGGCGCAGTCAACGTGCTGACCAAA GATCTCCCCAGCTCGCGGCTGGGGAATGGCTGTGCGGGTAATACGGCGCTGGCATGGCTGGAAAAATACAACGGTCCGGA ACTGACACTTACAGCGTTTGAACCACCGGCCAGCTCATAA
Upstream 100 bases:
>100_bases TAATATTTAACTGCTCAATACATCTAACCTTTCAGGAGTTTTCGGTTTGGCCAACTCATCCTCACGATATTCCGTTCTGA CTGCCGCCCATTGGGGGCCC
Downstream 100 bases:
>100_bases TCCAGGTGGGTAGTTGGGTTTCATCCTGCCATGCGCAATCGACAATGTGAAAACCCTGCGCACGGTAAAAATCTATCGCC GGTTGATTTTTTTGATAAAC
Product: biotin sulfoxide reductase
Products: Biotin. [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MLVETDGETVFSSHGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLTRCTTGYAVFASYLLGESDGIAKNAEWAAEICGVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERF IRFADFCRDPLAHPLKTASGKIEIFSQRIADYGYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPVTIHPDDAQARGIQDGDTVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS
Sequences:
>Translated_759_residues MLVETDGETVFSSHGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLTRCTTGYAVFASYLLGESDGIAKNAEWAAEICGVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERF IRFADFCRDPLAHPLKTASGKIEIFSQRIADYGYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPVTIHPDDAQARGIQDGDTVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS >Mature_759_residues MLVETDGETVFSSHGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLTRCTTGYAVFASYLLGESDGIAKNAEWAAEICGVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERF IRFADFCRDPLAHPLKTASGKIEIFSQRIADYGYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPVTIHPDDAQARGIQDGDTVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI145693196, Length=759, Percent_Identity=99.2094861660079, Blast_Score=1571, Evalue=0.0, Organism=Escherichia coli, GI87081994, Length=763, Percent_Identity=63.9580602883355, Blast_Score=1049, Evalue=0.0, Organism=Escherichia coli, GI1787231, Length=747, Percent_Identity=44.3105756358768, Blast_Score=592, Evalue=1e-170, Organism=Escherichia coli, GI87081797, Length=757, Percent_Identity=31.8361955085865, Blast_Score=300, Evalue=2e-82, Organism=Escherichia coli, GI1787870, Length=753, Percent_Identity=30.1460823373174, Blast_Score=285, Evalue=5e-78, Organism=Escherichia coli, GI171474008, Length=777, Percent_Identity=29.98712998713, Blast_Score=276, Evalue=4e-75, Organism=Escherichia coli, GI3868721, Length=473, Percent_Identity=23.2558139534884, Blast_Score=103, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 83957; Mature: 83957
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVETDGETVFSSHGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRG CEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCC QDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAG CCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHC GYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWN CCCCCCCCCCCCHHHHHHHHEECCHHHHHHCCCCCEEEECCCEEEEECCCCCCEEEEEEC ASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHH ENGWHDEAFLTRCTTGYAVFASYLLGESDGIAKNAEWAAEICGVNAAKIRELAALFHQNT HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC TMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSS EEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHH MQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHFPDIRFIWWAGGANFTHHQDT HCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH NRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV HHHHHHCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHHC PPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFA CCCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EFWQANQLIEMPENPDSERFIRFADFCRDPLAHPLKTASGKIEIFSQRIADYGYPDCPGH HHHCCCCEEECCCCCCHHHHHHHHHHHCCHHHCHHHCCCCCHHHHHHHHHHCCCCCCCCC PMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQAR CCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCHHHC GIQDGDTVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK CCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS CCCCHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure MLVETDGETVFSSHGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRG CEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCC QDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAG CCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHC GYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWN CCCCCCCCCCCCHHHHHHHHEECCHHHHHHCCCCCEEEECCCEEEEECCCCCCEEEEEEC ASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHH ENGWHDEAFLTRCTTGYAVFASYLLGESDGIAKNAEWAAEICGVNAAKIRELAALFHQNT HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC TMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSS EEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHH MQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHFPDIRFIWWAGGANFTHHQDT HCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH NRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV HHHHHHCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHHC PPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFA CCCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EFWQANQLIEMPENPDSERFIRFADFCRDPLAHPLKTASGKIEIFSQRIADYGYPDCPGH HHHCCCCEEECCCCCCHHHHHHHHHHHCCHHHCHHHCCCCCHHHHHHHHHHCCCCCCCCC PMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQAR CCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCHHHC GIQDGDTVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK CCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC DLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS CCCCHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180922; 8041620; 9278503 [H]