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The map label for this gene is yhjY

Identifier: 218697265

GI number: 218697265

Start: 4084213

End: 4084911

Strand: Reverse

Name: yhjY

Synonym: EC55989_4004

Alternate gene names: 218697265

Gene position: 4084911-4084213 (Counterclockwise)

Preceding gene: 218697268

Following gene: 218697264

Centisome position: 79.24

GC content: 50.07

Gene sequence:

>699_bases
ATGATCATAAAAAAAAGCGGTGGTCGCTGGCAGCTAAGCCTGCTGGCGAGCGTGGTAATCAGTGCCTTTTTTCTCAACAC
AGCTTACGCCTGGCAACAAGAATATATCGTTGATACGCAACCCGGACTTTCCACAGAGCGTTACACCTGGGATAGTGATC
ATCAACCTGATTACAACGATATTTTGTCGCAACGTATTCAAAGTAGCCAAAGGGCGCTGGGACTGGAAGTCAATCTGGCG
GAAGAAACTCCTGTGGATGTGACCAGCAGTATGAGTATGGGCTGGAATTTTCCTTTATATGAACAGGTTACAACCGGCCC
GGTCGCGGCATTACATTACGATGGCACAACCACCTCGATGTATAACGAGTTTGGCGACAGTACTACCACGCTGACCGATC
CGTTATGGCATGCCAGCGTGAGTACCTTAGGCTGGCGTGTTGACTCCCGGCTTGGCGATCTCCGACCCTGGGCGCAAATC
AGCTATAACCAGCAATTTGGCGAGAATATCTGGAAGGCGCAATCAGGCCTGAGCCGGATGACGGCGACAAACCAGAACGG
CAACTGGCTGGATGTCACCGTAGGCGCTGATATGTTGCTCAATCAAAATATTGCCGCCTATGCCGCGCTAACTCAGGCAG
AAAATACCACTAATAATAGCGACTATCTGTATACGATGGGGGTTAGCGCCAGATTTTAA

Upstream 100 bases:

>100_bases
GGTGAAAAAGTCAATATTTAATACAGGGCTACTATGCCCGATATCCTTCATACAATGACAATAATATTGCCGAATTCGGC
TCTTCCCTGGAGTCGTGTTA

Downstream 100 bases:

>100_bases
CGTAACAGTCACAATTGAAACCATTGAATAACAACAGTTGTGGCGATAGTGGGTGCTAACTTACCAAATAATAAATTTGG
TGAATAATTGTCGCGTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLA
EETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQI
SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF

Sequences:

>Translated_232_residues
MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLA
EETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQI
SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF
>Mature_232_residues
MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLA
EETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQI
SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF

Specific function: Unknown

COG id: COG5571

COG function: function code N; Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain

Homologues:

Organism=Escherichia coli, GI87082287, Length=232, Percent_Identity=100, Blast_Score=476, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHJY_ECOLI (P37663)

Other databases:

- EMBL:   U00039
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S47769
- RefSeq:   AP_004246.1
- RefSeq:   NP_418004.4
- ProteinModelPortal:   P37663
- STRING:   P37663
- EnsemblBacteria:   EBESCT00000003806
- EnsemblBacteria:   EBESCT00000014917
- GeneID:   948073
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5659
- KEGG:   eco:b3548
- EchoBASE:   EB2178
- EcoGene:   EG12269
- eggNOG:   COG5571
- GeneTree:   EBGT00050000011180
- HOGENOM:   HBG417175
- OMA:   PWAQVSY
- ProtClustDB:   CLSK880719
- BioCyc:   EcoCyc:EG12269-MONOMER
- Genevestigator:   P37663
- InterPro:   IPR005546
- InterPro:   IPR016955
- PIRSF:   PIRSF030748

Pfam domain/function: PF03797 Autotransporter; SSF103515 Auto_transptbeta

EC number: NA

Molecular weight: Translated: 25951; Mature: 25951

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS51208 AUTOTRANSPORTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYND
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEECCCCCCCCHHH
ILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSM
HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCHHH
YNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRM
HHHHCCCCCEECCCHHHHHHHHHHEEHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
TATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF
EEECCCCCEEEEEECCHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYND
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEECCCCCCCCHHH
ILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSM
HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCHHH
YNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRM
HHHHCCCCCEECCCHHHHHHHHHHEEHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
TATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF
EEECCCCCEEEEEECCHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503