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The map label for this gene is lpfE

Identifier: 218697259

GI number: 218697259

Start: 4077013

End: 4077537

Strand: Reverse

Name: lpfE

Synonym: EC55989_3998

Alternate gene names: 218697259

Gene position: 4077537-4077013 (Counterclockwise)

Preceding gene: 218697260

Following gene: 218697258

Centisome position: 79.1

GC content: 49.9

Gene sequence:

>525_bases
ATGAAGCGAACAATACTTGCGTTATGCCTGCTGCCTCTTTCCTTTTCGTCATTCGCGGCAACCACGGATTTAGGGCCGAA
AGGAACATTGAAATTCACCCTTAAAATCAGCCAGGGTGCTTGCGAACTGGTGAAAGACAGCGTTGAGGTTGACATGGGCA
CCGCGGTTCTCAAAAAGCCGGTAAGAATCGGAACGGAAATTAATCCCACTCCTTTTTCCATCGGCCTGAAAAACTGTAGC
GAAGTGGTCAGAGCCTACGTGACTATGGACGGTACACCCAATGCAGACGACTCAAATCTTTTTGCGCTGGATGCGGGTGG
CGCTACAGGCGTTGGGCTGAAAATCAAAACCGCTGCTGGAGTACAACAGTTCCCGGAAAATACAACGCCGACACCGGTTG
AGTTTGCAATTAACGGTGATGGCGCACATCAACTGAACTATATCGCCAGCTACGTGCCTATTCGCGCCGATGCAACTATT
GGTCGCGCAGATGCAACGGTCGACTTTACTGTACAGTACGAATAA

Upstream 100 bases:

>100_bases
CCACAATTACCGCTTATCCCGTTAGCACTACCGGAAAATTACCCGCTGCCGGGGATTATAGCGGTATTGCTACCATACAT
GTCGAACTGGAGTAACAGTC

Downstream 100 bases:

>100_bases
TTTCACATCTTAAGGGCCAGTTAACTGGCCCTTTTTACTGCTTTTTGTAACGCTAAAGTCTCTTTTCAAACTTGCATTTT
TGTAAATTTGTGCTTCATGC

Product: LpfE protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELVKDSVEVDMGTAVLKKPVRIGTEINPTPFSIGLKNCS
EVVRAYVTMDGTPNADDSNLFALDAGGATGVGLKIKTAAGVQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATI
GRADATVDFTVQYE

Sequences:

>Translated_174_residues
MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELVKDSVEVDMGTAVLKKPVRIGTEINPTPFSIGLKNCS
EVVRAYVTMDGTPNADDSNLFALDAGGATGVGLKIKTAAGVQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATI
GRADATVDFTVQYE
>Mature_174_residues
MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELVKDSVEVDMGTAVLKKPVRIGTEINPTPFSIGLKNCS
EVVRAYVTMDGTPNADDSNLFALDAGGATGVGLKIKTAAGVQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATI
GRADATVDFTVQYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18358; Mature: 18358

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELVKDSVEVDMGTAVLKKP
CCHHHEEHHHHHCCCCHHEEECCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCHHHHHCC
VRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFALDAGGATGVGLKIKTAAG
HHCCCCCCCCCEEECHHHHHHHHHEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCC
VQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATIGRADATVDFTVQYE
HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCEEECCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELVKDSVEVDMGTAVLKKP
CCHHHEEHHHHHCCCCHHEEECCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCHHHHHCC
VRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFALDAGGATGVGLKIKTAAG
HHCCCCCCCCCEEECHHHHHHHHHEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCC
VQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATIGRADATVDFTVQYE
HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCEEECCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721701; 11677609 [H]