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The map label for this gene is yraK

Identifier: 218696852

GI number: 218696852

Start: 3648612

End: 3649703

Strand: Direct

Name: yraK

Synonym: EC55989_3565

Alternate gene names: 218696852

Gene position: 3648612-3649703 (Clockwise)

Preceding gene: 218696851

Following gene: 218696854

Centisome position: 70.78

GC content: 47.71

Gene sequence:

>1092_bases
ATGAAAAGAGCGCCTCTTATAACAGGACTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGC
CGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGAC
GGGAGTTTACCTCTGCCACGCTAAGTAGCACTAACTGGCAATACGCCTGTACCTGCTCTGCGGGTAAGGCAGTTAAACTT
GTCTATATGGTCAGCCCTGTACTTACCACCACTGGACATCAAGCAGGATATTACAAACTCAATGATAGTCTGGATATTAA
AACCACATTACAGGCGAATGACATTCCAGGACTCGTGACTGACCAGACCGTTTCTGTTAACACCCGATTCACACAGATAA
AAAGCAACACCGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGACACGTCTCGTTATGGACCCGTTAATATT
GGTGCAAATACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGATATTGCCGT
CATTAAAGGCGCATGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGG
GAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGCGATGTTATTAAGGTTAATTTTGGATTCATCAATGGTCAG
AAGTTTACCACCCGCAATGCCATGCCAGACGGTTTTACTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTC
AAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGGTAGTAGACCAGTACAACCTGGTCGCCAGACGAA
GAAGTTCAGACAATGCGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCAGAAC
GGTATCCTTCCCGTTGATCCTTCCGGGCATGGCACCATCAACATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCT
GGAAACAGGAAAATTTCAGGGCACCGCCACCATTACCGTCATCGTGCGGTAA

Upstream 100 bases:

>100_bases
CAGGCAGATCAACAATGTCAGTTTGCTTTTAGTACACCGGATTCAGAACCAACAACCTCTGTATTACAAGGCACGGCGCA
GTGCCATTAAGGATAAAAAA

Downstream 100 bases:

>100_bases
AAGAAGACGTTGCGTTTTGATTAACGCAACGCTTCGGCACTCTTACCCCTGCTGCTCCAGCGCATACTTATACAGCGCAT
TTTTCTTCACGCCGTGAATT

Product: putative fimbrial-like adhesin protein (lpfD-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACTCSAGKAVKL
VYMVSPVLTTTGHQAGYYKLNDSLDIKTTLQANDIPGLVTDQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTINMRAWPVNLVGGELETGKFQGTATITVIVR

Sequences:

>Translated_363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACTCSAGKAVKL
VYMVSPVLTTTGHQAGYYKLNDSLDIKTTLQANDIPGLVTDQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTINMRAWPVNLVGGELETGKFQGTATITVIVR
>Mature_363_residues
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACTCSAGKAVKL
VYMVSPVLTTTGHQAGYYKLNDSLDIKTTLQANDIPGLVTDQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNI
GANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAPDVGIRIENLGGGVANIPFQN
GILPVDPSGHGTINMRAWPVNLVGGELETGKFQGTATITVIVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1789534, Length=363, Percent_Identity=98.0716253443526, Blast_Score=729, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38479; Mature: 38479

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSAT
CCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCCCCEEEEEE
LSSTNWQYACTCSAGKAVKLVYMVSPVLTTTGHQAGYYKLNDSLDIKTTLQANDIPGLVT
ECCCCEEEEEEECCCCEEEEEEEEECHHCCCCCCCCEEEECCCCEEEEEEECCCCCCEEE
DQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTI
CCEEEECEEEEEEECCEEEEECCCCCEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCC
PKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCC
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAP
EEEECCCCCCCCCEEEEEEEECCCCHHHHCCEEEEEECCCCCCCCCHHHHEECCCCCCCC
DVGIRIENLGGGVANIPFQNGILPVDPSGHGTINMRAWPVNLVGGELETGKFQGTATITV
CCEEEEECCCCCEEECCCCCCEEEECCCCCCEEEEEEEEEEEECCEECCCEECCEEEEEE
IVR
EEC
>Mature Secondary Structure
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSAT
CCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCCCCEEEEEE
LSSTNWQYACTCSAGKAVKLVYMVSPVLTTTGHQAGYYKLNDSLDIKTTLQANDIPGLVT
ECCCCEEEEEEECCCCEEEEEEEEECHHCCCCCCCCEEEECCCCEEEEEEECCCCCCEEE
DQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTI
CCEEEECEEEEEEECCEEEEECCCCCEECCCCCCCCCEEECCCCEEEEEEECCCCCCCCC
PKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ
CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCC
KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAP
EEEECCCCCCCCCEEEEEEEECCCCHHHHCCEEEEEECCCCCCCCCHHHHEECCCCCCCC
DVGIRIENLGGGVANIPFQNGILPVDPSGHGTINMRAWPVNLVGGELETGKFQGTATITV
CCEEEEECCCCCEEECCCCCCEEEECCCCCCEEEEEEEEEEEECCEECCCEECCEEEEEE
IVR
EEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]