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The map label for this gene is yraM

Identifier: 218696854

GI number: 218696854

Start: 3650670

End: 3652706

Strand: Direct

Name: yraM

Synonym: EC55989_3567

Alternate gene names: 218696854

Gene position: 3650670-3652706 (Clockwise)

Preceding gene: 218696852

Following gene: 218696855

Centisome position: 70.82

GC content: 54.25

Gene sequence:

>2037_bases
ATGGTACCCTCAACATTTTCTCGTTTGAAAGCCGCGCGTTGTCTGCCTGTTGTTCTGGCAGCCCTGATTTTCGCCGGTTG
TGGCACCCATACTCCCGATCAGTCCACTGCTTATATGCAGGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGA
TGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGG
CAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATTCTCAGCGTCGCGAGAAAACACTGCTGGCGGTAGA
GATTAAACTGGCGCAGAAAGATTTTGCTGGCGCGCAAAACTTGCTGGCGAAAATCACACCTGCCGATTTAGAACAAAACC
AGCAAGCGCGTTACTGGCAGGCAAAAATCGATGCCAGCCAGGGGCGTCCTTCCATTGATTTACTGCGCGCGTTAATTGCT
CAGGAACCGCTGCTCGGCGCGAAAGAAAAACAGCAGAATATTGATGCCACCTGGCAGGCGCTCTCCTCCATGACTCAGGA
ACAGGCGAATACGCTGGTGATCAACGCCGACGAAAATATTCTGCAAGGCTGGCTGGATCTGCAGCGCGTCTGGTTTGATA
ACCGTAACGATCCCGACATGATGAAAGCCGGGATCGCCGACTGGCAAAAACGTTATCCGAACAATCCGGGCGCGAAAATG
CTGCCAACGCAGTTGGTTAACGTAAAAGCGTTTAAACCAGCCTCGACCAACAAAATCGCCCTGCTGTTGCCGCTGAATGG
CCAGGCAGCGGTATTTGGTCGCACTATTCAGCAAGGCTTTGAAGCGGCGAAAAATATCGGCACTCAGCCAGTGGCGGCTC
AGGTAGCTGCCGCACCTGCCGCAGACGTAGCTGAACAACCTCAGCCGCAAACCGTGGATGGCGTTGCCAGCCCGGCACAA
GCCTCGGTTAGCGATCTGACCGGTGAACAGCCTGCGGCACAGCCAGCGCCTGTAAGCACCCCGGCAGCAACCACCACAGC
GGTAAGCGCGCCAGCGAATCCATCCGCAGAACTGAAAATCTACGATACCTCATCACAACCACTTAGCCAGATCTTAAGCC
AGGTTCAGCAGGATGGCGCGAGTATTGTGGTTGGTCCGTTGCTGAAAAATAACGTTGAAGAGTTGCTTAAGAGCAACACC
CCGCTGAACGTGCTGGCACTGAACCAGCCGGAGAATATCGAAAACCGCGTCAATATTTGTTACTTCGCGCTTTCACCGGA
AGACGAAGCGCGCGATGCAGCGCGTCATATTCGTGACCAGGGTAAACAAGCGCCGCTGGTGCTGATCCCACGCAGTTCAT
TGGGCGATCGCGTAGCCAATGCGTTTGCGCAGGAGTGGCAGAAACTGGGCGGCGGCACCGTTCTGCAACAAAAATTTGGT
TCCACCAGCGAATTACGCGCGGGTGTTAACGGCGGTTCTGGTATCGCTTTAACGGGTACCCCGATTACTCCCAGAGCGAC
AACCGACTCCGGCATGACGACCAACAATCCAACGCTGCAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTC
GTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGC
CAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGG
CTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACG
ATTATTCACTGGCTCGCATGTATGCGATGGGCGTCGATGCCTGGTCGCTGGCAAATCATTTCTCACAAATGCGCCAGGTT
CAGGGTTTTGAAATCAACGGTAATACCGGAAGCCTGACGGCAAACCCGGATTGCGTGATTAACAGGAAGTTATCATGGCT
ACAGTACCAACAAGGTCAGGTAGTCCCCGCCAGTTAA

Upstream 100 bases:

>100_bases
GGCCCTGAGAATTATCCGCCGATTGGTGTTGTTTCATTGTGTCGTCCGTATTGCCGATTTAATATTGAGCATTGCGTAAA
AAAATATCACTGGATACATT

Downstream 100 bases:

>100_bases
CCACCAAACAGACCGGCGATGCGTGGGAAGTACAAGCGCGTCGCTGGCTGGAAGGCAAAGGACTGCGATTTGTCGCCGCT
AACGTGAACGAGCGTGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTG
QAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
QEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQ
ASVSDLTGEQPAAQPAPVSTPAATTTAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNT
PLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGS
QSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQV
QGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS

Sequences:

>Translated_678_residues
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTG
QAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
QEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQ
ASVSDLTGEQPAAQPAPVSTPAATTTAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNT
PLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGS
QSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQV
QGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS
>Mature_678_residues
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTG
QAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
QEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQ
ASVSDLTGEQPAAQPAPVSTPAATTTAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNT
PLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGS
QSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQV
QGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1655 [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=678, Percent_Identity=98.5250737463127, Blast_Score=1359, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 72842; Mature: 72842

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCC
TRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQN
CEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHEEEEEEEEEHHHHHHCHHH
LLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQA
HHHHCCCHHCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHCHHHHHHH
LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPA
CCHHHEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
ADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPAPVSTPAATTTAVSAPANPSAELKI
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEE
YDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNIC
EECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE
YFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
EEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHCC
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYI
CHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE
VATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGN
EECCCCEEEHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEECCC
LPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVI
CHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCEECCCCEEE
NRKLSWLQYQQGQVVPAS
ECCHHHHHHCCCEEECCC
>Mature Secondary Structure
MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCC
TRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQN
CEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHEEEEEEEEEHHHHHHCHHH
LLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQA
HHHHCCCHHCCCCCCCHHEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHCHHHHHHH
LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM
HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPA
CCHHHEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
ADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPAPVSTPAATTTAVSAPANPSAELKI
HHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEE
YDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNIC
EECCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE
YFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG
EEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHCC
STSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYI
CHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE
VATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGN
EECCCCEEEHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEECCC
LPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVI
CHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCEECCCCEEE
NRKLSWLQYQQGQVVPAS
ECCHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]