Click here to switch to the map view.

The map label for this gene is garK

Identifier: 218696829

GI number: 218696829

Start: 3625593

End: 3626819

Strand: Reverse

Name: garK

Synonym: EC55989_3542

Alternate gene names: 218696829

Gene position: 3626819-3625593 (Counterclockwise)

Preceding gene: 218696830

Following gene: 218696824

Centisome position: 70.36

GC content: 53.79

Gene sequence:

>1227_bases
ATGGCGTATTGCAATCCGGGCCTGGAATCCAGGCCGAATAAGAGAAACGCCCTCCGGCGTCATGTGGTAACAGGCATAGG
TATGAAAATCGTAATCGCCCCAGACTCTTATAAAGAAAGTTTATCTGCCAGCGAGGTTGCGCAGGCGATAGAAAAAGGAT
TTCGGGAAATTTTTCCTGATGCACAGTACGTTTCTATTCCGGTTGCCGACGGTGGCGAAGGAACGGTGGAAGCGATGATT
GCAGCCACCCAGGGTTCTGAACGTCACGCCTGGGTTACAGGGCCGCTGGGCGAGAAAGTGAATGCCAGTTGGGGGATCTC
CGGCGATGGCAAAACCGCGTTTATTGAAATGGCGGCGGCCAGTGGGCTGGAGCTGGTACCTGCGGAAAAACGCGATCCAC
TCGTGACCACTTCACGCGGCACAGGCGAGTTAATCCTGCAGGCGCTGGAGAGCGGCGCGACAAACATTATTATCGGCATT
GGCGGTAGCGCTACAAATGATGGCGGCGCAGGCATGGTACAGGCGCTGGGGGCGAAATTATGCGACGCCAACGGCAATGA
AATTGGTTTTGGCGGCGGTAGTCTTAATACTCTGAATGATATTGATATTTCCGGCCTCGATCCGCGCTTAAAAGATTGCG
TCATTCGCGTCGCTTGTGATGTCACCAATCCGCTGGTGGGCGATAACGGCGCATCGCGCATCTTTGGCCCACAAAAGGGA
GCCAGTGAAGCGATGATTGTTGAGCTGGACAATAACCTCTCTCACTATGCCGATGTCATTAAAAAAGCGCTGCATGTTGA
TGTGAAAGATGTCCCCGGCGCAGGAGCTGCGGGCGGTATGGGTGCGGCGCTGATGGCGTTTCTTGGTGCGGAACTGAAAA
GTGGTATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGG
CGTATTGACAGCCAGAGTATTCACGGCAAGGTACCGATTGGCGTTGCAAACGTGGCGAAGAAGTACCATAAACCGGTGAT
TGGCATTGCGGGTAGCCTGACCGATGATGTTGGCGTTGTACATCAGCATGGCATCGATGCGGTCTTCAGCGTATTGACCA
GCATAGGTACGTTGGACGAAGCATTCCGCGGGGCTTATGACAATATCTGCCGTGCTTCACGTAATATCGCCGCGACACTG
GCGATTGGAATGCGCAACGCGGGGTGA

Upstream 100 bases:

>100_bases
GCGAGCAGATGGTTTAGGAACGGCGGATCATAGCGCCCTGGCGTGCTACTACGAAAAACTGGCGAAAGTCGAAGTTACTC
GTTAATGACGTCGTGCCCGG

Downstream 100 bases:

>100_bases
CAAGGGCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGGAG
ACGGGCGGAGGGGAGGAAAG

Product: glycerate kinase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAYCNPGLESRPNKRNALRRHVVTGIGMKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSIPVADGGEGTVEAMI
AATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQALESGATNIIIGI
GGSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKG
ASEAMIVELDNNLSHYADVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEG
RIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATL
AIGMRNAG

Sequences:

>Translated_408_residues
MAYCNPGLESRPNKRNALRRHVVTGIGMKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSIPVADGGEGTVEAMI
AATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQALESGATNIIIGI
GGSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKG
ASEAMIVELDNNLSHYADVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEG
RIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATL
AIGMRNAG
>Mature_407_residues
AYCNPGLESRPNKRNALRRHVVTGIGMKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSIPVADGGEGTVEAMIA
ATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQALESGATNIIIGIG
GSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGA
SEAMIVELDNNLSHYADVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEGR
IDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLA
IGMRNAG

Specific function: Unknown

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI145693185, Length=381, Percent_Identity=99.2125984251969, Blast_Score=761, Evalue=0.0,
Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=56.3829787234042, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 42113; Mature: 41982

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYCNPGLESRPNKRNALRRHVVTGIGMKIVIAPDSYKESLSASEVAQAIEKGFREIFPD
CCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHCCC
AQYVSIPVADGGEGTVEAMIAATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAA
CEEEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECC
SGLELVPAEKRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKL
CCCEECCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
CDANGNEIGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKG
CCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ASEAMIVELDNNLSHYADVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVT
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEH
TALNLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVV
HHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHH
HQHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
>Mature Secondary Structure 
AYCNPGLESRPNKRNALRRHVVTGIGMKIVIAPDSYKESLSASEVAQAIEKGFREIFPD
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHCCC
AQYVSIPVADGGEGTVEAMIAATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAA
CEEEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECC
SGLELVPAEKRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKL
CCCEECCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
CDANGNEIGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKG
CCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ASEAMIVELDNNLSHYADVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVT
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEH
TALNLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVV
HHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHH
HQHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1705543; 9278503 [H]