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The map label for this gene is yqiB

Identifier: 218696739

GI number: 218696739

Start: 3526948

End: 3527370

Strand: Reverse

Name: yqiB

Synonym: EC55989_3449

Alternate gene names: 218696739

Gene position: 3527370-3526948 (Counterclockwise)

Preceding gene: 218696740

Following gene: 218696738

Centisome position: 68.43

GC content: 48.7

Gene sequence:

>423_bases
ATGAAGCGTTACACACCTGACTTTCCTGAAATGATGCGCCTGTGCGAGATGAACTTTTCACAATTGCGCCGTTTGTTACC
GCGCAATGACGCACCCGGCGAAACTGTAAGCTATCAGGTGGCAAACGCACAATATCGGCTGACGATTGTGGAATCGACCC
GATACACTACCCTGGTGACAATAGAACAGACTGCGCCCGCGATCAGTTACTGGAGCCTTCCGTCAATGACGGTGCGTCTG
TATCATGACGCGATGGTGGCTGAAGTGTGTTCAAGCCAGCAGATTTTTCGCTTCAAAGCGCGGTATGATTATCCTAATAA
AAAGTTGCATCAACGCGACGAAAAGCATCAAATTAACCAGTTTTTAGCGGACTGGTTGCGATACTGTTTAGCACATGGAG
CGATGGCGATTCCGGTTTACTAG

Upstream 100 bases:

>100_bases
CCAGTGGGTAGAAGAGGGGAAAATCGACAACGCAGCGTCGGTCATCGCTTTGCAATGGCTGCAGCTGCATCATCAAGCGT
TAAAAAATGAGTGGGCATAA

Downstream 100 bases:

>100_bases
CGTCGTGAAACCTAAGGACACCATTTGGAAAGCCTGTTAACCCTTCCTCTGGCTGGTGAGGCCAGAGTCAGGATTTTACA
AATTACCGATACTCACCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY

Sequences:

>Translated_140_residues
MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY
>Mature_140_residues
MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY

Specific function: Unknown

COG id: COG3151

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789411, Length=140, Percent_Identity=100, Blast_Score=296, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQIB_ECO57 (P0ADU9)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A98119
- PIR:   H85963
- RefSeq:   NP_289613.1
- RefSeq:   NP_311948.1
- ProteinModelPortal:   P0ADU9
- EnsemblBacteria:   EBESCT00000025431
- EnsemblBacteria:   EBESCT00000059435
- GeneID:   916253
- GeneID:   959516
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4390
- KEGG:   ecs:ECs3921
- GeneTree:   EBGT00050000010940
- HOGENOM:   HBG641384
- OMA:   RSIYPYP
- ProtClustDB:   PRK11039
- BioCyc:   ECOL83334:ECS3921-MONOMER
- InterPro:   IPR009659

Pfam domain/function: PF06853 DUF1249

EC number: NA

Molecular weight: Translated: 16548; Mature: 16548

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVT
CCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEECCCEEEEEE
IEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ
EECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHHH
FLADWLRYCLAHGAMAIPVY
HHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVT
CCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEECCCEEEEEE
IEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ
EECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHHH
FLADWLRYCLAHGAMAIPVY
HHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796