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The map label for this gene is 218696600

Identifier: 218696600

GI number: 218696600

Start: 3387122

End: 3387598

Strand: Reverse

Name: 218696600

Synonym: EC55989_3298

Alternate gene names: NA

Gene position: 3387598-3387122 (Counterclockwise)

Preceding gene: 218696605

Following gene: 218696599

Centisome position: 65.72

GC content: 39.83

Gene sequence:

>477_bases
ATGAGCAATACACAACATAAACTTGATAAAACCCGCCCCCCACGAGTACAGATAACGTATGATGTTGAAACCGGAGATGC
TGAAACTGCGAAAGAGTTACCCCTTGTCATCGGGGTTTTGGGTGAGTACTCTTCGTCAGAAAAACCATTGAGAGAACGAA
AATTCATTAGTATAGATAAAGACAATTTTGATGAAGTTATGGCATCAATGAGTCCGACTGCTCATTTTATGGTGGACAGT
GTTATCCCGGGAAATGAAGGAAAACTGGATGTCGAACTGAGGTTTAGTTGCAAAGATGATTTTTCTCCCGATAATGTGAT
TCAACAGGTTGAGTGTCTAAGAAAATTATCGGAATTGAGGTTGCATCTTTGTGACCTACGAAACAGGGCTGCAAGTAATG
AGAAACTGAAAGAAAAACTTCAGGAATTGCTGGTGACTACTAATGGCAATCCTGAAAACGATGAAAGTAAGGAATAA

Upstream 100 bases:

>100_bases
ATTTAGGTCATATAATTATGCTATGTTCATCAATATTATGATAGTAGATTATAGTGTTCTTAATAAAAAAGAATTTAAAA
GCTGTTTGTAGGATAGAAAC

Downstream 100 bases:

>100_bases
ACATGACAGTTGCATCAACATTAGGGCTGAATGAAACTCAGTATGCTACAGATGATTGTCTTGAAGAGATTATAAATAAT
ACCAGAGCTGTGAGACAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSNTQHKLDKTRPPRVQITYDVETGDAETAKELPLVIGVLGEYSSSEKPLRERKFISIDKDNFDEVMASMSPTAHFMVDS
VIPGNEGKLDVELRFSCKDDFSPDNVIQQVECLRKLSELRLHLCDLRNRAASNEKLKEKLQELLVTTNGNPENDESKE

Sequences:

>Translated_158_residues
MSNTQHKLDKTRPPRVQITYDVETGDAETAKELPLVIGVLGEYSSSEKPLRERKFISIDKDNFDEVMASMSPTAHFMVDS
VIPGNEGKLDVELRFSCKDDFSPDNVIQQVECLRKLSELRLHLCDLRNRAASNEKLKEKLQELLVTTNGNPENDESKE
>Mature_157_residues
SNTQHKLDKTRPPRVQITYDVETGDAETAKELPLVIGVLGEYSSSEKPLRERKFISIDKDNFDEVMASMSPTAHFMVDSV
IPGNEGKLDVELRFSCKDDFSPDNVIQQVECLRKLSELRLHLCDLRNRAASNEKLKEKLQELLVTTNGNPENDESKE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17936; Mature: 17805

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTQHKLDKTRPPRVQITYDVETGDAETAKELPLVIGVLGEYSSSEKPLRERKFISIDK
CCCCCCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHEEHHCCCCCCCCCHHHCCEEECCC
DNFDEVMASMSPTAHFMVDSVIPGNEGKLDVELRFSCKDDFSPDNVIQQVECLRKLSELR
CCHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LHLCDLRNRAASNEKLKEKLQELLVTTNGNPENDESKE
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SNTQHKLDKTRPPRVQITYDVETGDAETAKELPLVIGVLGEYSSSEKPLRERKFISIDK
CCCCCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHEEHHCCCCCCCCCHHHCCEEECCC
DNFDEVMASMSPTAHFMVDSVIPGNEGKLDVELRFSCKDDFSPDNVIQQVECLRKLSELR
CCHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LHLCDLRNRAASNEKLKEKLQELLVTTNGNPENDESKE
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA