| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218696599
Identifier: 218696599
GI number: 218696599
Start: 3385641
End: 3387119
Strand: Reverse
Name: 218696599
Synonym: EC55989_3297
Alternate gene names: NA
Gene position: 3387119-3385641 (Counterclockwise)
Preceding gene: 218696600
Following gene: 218696598
Centisome position: 65.71
GC content: 41.38
Gene sequence:
>1479_bases ATGACAGTTGCATCAACATTAGGGCTGAATGAAACTCAGTATGCTACAGATGATTGTCTTGAAGAGATTATAAATAATAC CAGAGCTGTGAGACAGGATTCTGAAAAGACCAGGTTTAAACTACAGATTAATAATTTCCTTGCTGAAGTTGCCAGTGGTT CTTTGGTCATTAACAGCGATTTAATCGGTAGTATTGAAAAGCGGATTGCTGATATTGATAAGTTGATGTCTGAGCAGCTT AGTCTGATTATGCATGCGACTGAATTTCAAAAAATAGAATCAGCATGGACGGGACTTTATAAGCTGGTTCAGGCCAGCGT TACTGAAAATGTAAAATACACGGTGTTACACTGTACTAAAAAGGAATTGCTCAAAGACTTCAAGTCAGCCTCAGATTTCG ATCAGTCTGTCTTATTTAAGAATATTTATGAAAGCGAGTATGGAACGTTCGGGGGAACACCGTATTCTGCTTTTGTTGGT GATTTCTATTTTGATAATACACCGCAGGATATTGATTTGCTGGAGCATATTTCCCATGTTGCTGCCAGTGCTCATGCCCC GTTTCTGAGTGCTATTGCTCCGGGTATGTTGTCCATGAGTTCATTTAGCGAATTACCCTACCCGCGTGATCTGGCAAAAT TGTTTGAGACAACAGATTATGCCCGTTGGCGTAGTTTCAGGCAGACAGATGACAGTCGTTATGTGGGATTGACTTTGCCA CAGTCTCTGGGGCGTATTCCATATGGCATGAAGACTATACCTGCCGAAACGTTTAATTTTGAAGAGCACATTAGTGAAGA TAACTCAGGCAAAGACTATCTGTGGGTAAATACAGCTTTTGAACTTGCCTGCCGGATAGTTGATGCTTTTGAGGAGTATG GCTGGTGTGCAGCAATTCGGGGCGTGGAAGGTGGCGGTTTGGTTAAATCATTGCCGGCCTATAATTATGTATCCCATACA GGTGAGCGACTTTTACAATGTCCGACGGAGGTTGCTATCTCAGACCGTCGGGAAAAAGAATTGTCAGATCTCGGTTTTAT TCCTCTGGTTTATTGTAAAGGTACTGATTTTGCGGCATTTTTCGCTGTTCAGTCGGTAAACAAAGCACGACTGTATAATA CTGATCAGGCTAATGCGAATGCAAAATTATCCAGTCAGCTTCAGTATATATTAGCAACATCACGATTCGCACATTATCTT AAAGTGATTGTTCGTGACAAAGTTGGAAGCTTTATGTCGAGGACAGAATGTCAGACATATCTGCAAAACTGGATCATGCA ATATGTTGTGGCATCAGATAACGCTGGTCAGGAGACAAAGGCTCGTTATCCATTACGTGAGGCATCTGTTGAAGTTATTG AAGTCCCTGGAAGTCCGGGAAATTATCGTGCAATTGCATGGATTAAACCTCATTTTCAGCTTGAGGGTTTAAGTATGTCA TTGCGTCTTGTTGCTGATTTACCATCAAGTGTAAGTTAA
Upstream 100 bases:
>100_bases GAAACAGGGCTGCAAGTAATGAGAAACTGAAAGAAAAACTTCAGGAATTGCTGGTGACTACTAATGGCAATCCTGAAAAC GATGAAAGTAAGGAATAAAC
Downstream 100 bases:
>100_bases GAGGTTATTATGGTCGGAGTTATGAGTAATTCTTCTGCTCTTAGCAGGGAGTTTGTCAAAATAGAGATAGGTGGAAAAGT TATAAAGGGAAATTCAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTVASTLGLNETQYATDDCLEEIINNTRAVRQDSEKTRFKLQINNFLAEVASGSLVINSDLIGSIEKRIADIDKLMSEQL SLIMHATEFQKIESAWTGLYKLVQASVTENVKYTVLHCTKKELLKDFKSASDFDQSVLFKNIYESEYGTFGGTPYSAFVG DFYFDNTPQDIDLLEHISHVAASAHAPFLSAIAPGMLSMSSFSELPYPRDLAKLFETTDYARWRSFRQTDDSRYVGLTLP QSLGRIPYGMKTIPAETFNFEEHISEDNSGKDYLWVNTAFELACRIVDAFEEYGWCAAIRGVEGGGLVKSLPAYNYVSHT GERLLQCPTEVAISDRREKELSDLGFIPLVYCKGTDFAAFFAVQSVNKARLYNTDQANANAKLSSQLQYILATSRFAHYL KVIVRDKVGSFMSRTECQTYLQNWIMQYVVASDNAGQETKARYPLREASVEVIEVPGSPGNYRAIAWIKPHFQLEGLSMS LRLVADLPSSVS
Sequences:
>Translated_492_residues MTVASTLGLNETQYATDDCLEEIINNTRAVRQDSEKTRFKLQINNFLAEVASGSLVINSDLIGSIEKRIADIDKLMSEQL SLIMHATEFQKIESAWTGLYKLVQASVTENVKYTVLHCTKKELLKDFKSASDFDQSVLFKNIYESEYGTFGGTPYSAFVG DFYFDNTPQDIDLLEHISHVAASAHAPFLSAIAPGMLSMSSFSELPYPRDLAKLFETTDYARWRSFRQTDDSRYVGLTLP QSLGRIPYGMKTIPAETFNFEEHISEDNSGKDYLWVNTAFELACRIVDAFEEYGWCAAIRGVEGGGLVKSLPAYNYVSHT GERLLQCPTEVAISDRREKELSDLGFIPLVYCKGTDFAAFFAVQSVNKARLYNTDQANANAKLSSQLQYILATSRFAHYL KVIVRDKVGSFMSRTECQTYLQNWIMQYVVASDNAGQETKARYPLREASVEVIEVPGSPGNYRAIAWIKPHFQLEGLSMS LRLVADLPSSVS >Mature_491_residues TVASTLGLNETQYATDDCLEEIINNTRAVRQDSEKTRFKLQINNFLAEVASGSLVINSDLIGSIEKRIADIDKLMSEQLS LIMHATEFQKIESAWTGLYKLVQASVTENVKYTVLHCTKKELLKDFKSASDFDQSVLFKNIYESEYGTFGGTPYSAFVGD FYFDNTPQDIDLLEHISHVAASAHAPFLSAIAPGMLSMSSFSELPYPRDLAKLFETTDYARWRSFRQTDDSRYVGLTLPQ SLGRIPYGMKTIPAETFNFEEHISEDNSGKDYLWVNTAFELACRIVDAFEEYGWCAAIRGVEGGGLVKSLPAYNYVSHTG ERLLQCPTEVAISDRREKELSDLGFIPLVYCKGTDFAAFFAVQSVNKARLYNTDQANANAKLSSQLQYILATSRFAHYLK VIVRDKVGSFMSRTECQTYLQNWIMQYVVASDNAGQETKARYPLREASVEVIEVPGSPGNYRAIAWIKPHFQLEGLSMSL RLVADLPSSVS
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55204; Mature: 55073
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVASTLGLNETQYATDDCLEEIINNTRAVRQDSEKTRFKLQINNFLAEVASGSLVINSD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHCCCEEECHH LIGSIEKRIADIDKLMSEQLSLIMHATEFQKIESAWTGLYKLVQASVTENVKYTVLHCTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH KELLKDFKSASDFDQSVLFKNIYESEYGTFGGTPYSAFVGDFYFDNTPQDIDLLEHISHV HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH AASAHAPFLSAIAPGMLSMSSFSELPYPRDLAKLFETTDYARWRSFRQTDDSRYVGLTLP HHHHCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECH QSLGRIPYGMKTIPAETFNFEEHISEDNSGKDYLWVNTAFELACRIVDAFEEYGWCAAIR HHHCCCCCCCEECCCCCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEC GVEGGGLVKSLPAYNYVSHTGERLLQCPTEVAISDRREKELSDLGFIPLVYCKGTDFAAF CCCCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCCEEEEEECCCCHHHH FAVQSVNKARLYNTDQANANAKLSSQLQYILATSRFAHYLKVIVRDKVGSFMSRTECQTY HHHHHCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQNWIMQYVVASDNAGQETKARYPLREASVEVIEVPGSPGNYRAIAWIKPHFQLEGLSMS HHHHHHHHHHHCCCCCCCHHHCCCHHHCCEEEEECCCCCCCEEEEEEECCCEEEECCCEE LRLVADLPSSVS EEEEECCCCCCC >Mature Secondary Structure TVASTLGLNETQYATDDCLEEIINNTRAVRQDSEKTRFKLQINNFLAEVASGSLVINSD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHCCCEEECHH LIGSIEKRIADIDKLMSEQLSLIMHATEFQKIESAWTGLYKLVQASVTENVKYTVLHCTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH KELLKDFKSASDFDQSVLFKNIYESEYGTFGGTPYSAFVGDFYFDNTPQDIDLLEHISHV HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH AASAHAPFLSAIAPGMLSMSSFSELPYPRDLAKLFETTDYARWRSFRQTDDSRYVGLTLP HHHHCCCHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECH QSLGRIPYGMKTIPAETFNFEEHISEDNSGKDYLWVNTAFELACRIVDAFEEYGWCAAIR HHHCCCCCCCEECCCCCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEC GVEGGGLVKSLPAYNYVSHTGERLLQCPTEVAISDRREKELSDLGFIPLVYCKGTDFAAF CCCCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCCEEEEEECCCCHHHH FAVQSVNKARLYNTDQANANAKLSSQLQYILATSRFAHYLKVIVRDKVGSFMSRTECQTY HHHHHCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQNWIMQYVVASDNAGQETKARYPLREASVEVIEVPGSPGNYRAIAWIKPHFQLEGLSMS HHHHHHHHHHHCCCCCCCHHHCCCHHHCCEEEEECCCCCCCEEEEEEECCCEEEECCCEE LRLVADLPSSVS EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA