Click here to switch to the map view.

The map label for this gene is ygcP

Identifier: 218696367

GI number: 218696367

Start: 3110184

End: 3110759

Strand: Direct

Name: ygcP

Synonym: EC55989_3042

Alternate gene names: 218696367

Gene position: 3110184-3110759 (Clockwise)

Preceding gene: 218696366

Following gene: 218696373

Centisome position: 60.33

GC content: 46.53

Gene sequence:

>576_bases
ATGCCCCTCTTACACCTGCTCCGCCAGAATCCGGTGATTGCTGCCGTTAAAGATAATGCCAGCCTGCAACTGGCAATCGA
TTCTGAATGCCAATTTATTTCCGTGTTGTACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCG
GGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTG
ACCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCG
CCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGCAAGTTGCGCAATCGAATCCGGATTGTATTGAGATCC
TGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGC
GATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGC
GAAAAAATTACTTTGA

Upstream 100 bases:

>100_bases
TGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCACCTACCGCTTTGG
ATAAATAATAAGGATAATTT

Downstream 100 bases:

>100_bases
CGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGC
TTGACGCGTCTTATCAGGCC

Product: putative anti-terminator regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLV
TEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
DEEDARNAINAGVVALSTTNTGVWTLAKKLL

Sequences:

>Translated_191_residues
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLV
TEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
DEEDARNAINAGVVALSTTNTGVWTLAKKLL
>Mature_190_residues
PLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVT
EADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCD
EEDARNAINAGVVALSTTNTGVWTLAKKLL

Specific function: Unknown

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis glpP

Homologues:

Organism=Escherichia coli, GI1789127, Length=191, Percent_Identity=100, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGCP_ECOLI (Q46906)

Other databases:

- EMBL:   U29579
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D65058
- RefSeq:   AP_003335.1
- RefSeq:   NP_417248.1
- ProteinModelPortal:   Q46906
- SMR:   Q46906
- DIP:   DIP-12132N
- IntAct:   Q46906
- MINT:   MINT-1221014
- STRING:   Q46906
- PRIDE:   Q46906
- EnsemblBacteria:   EBESCT00000002759
- EnsemblBacteria:   EBESCT00000017568
- GeneID:   947536
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2738
- KEGG:   eco:b2768
- EchoBASE:   EB2924
- EcoGene:   EG13123
- eggNOG:   COG1954
- GeneTree:   EBGT00050000011691
- HOGENOM:   HBG470798
- OMA:   AGGLIRT
- ProtClustDB:   CLSK880484
- BioCyc:   EcoCyc:G7434-MONOMER
- Genevestigator:   Q46906
- InterPro:   IPR006699
- Gene3D:   G3DSA:3.20.20.400

Pfam domain/function: PF04309 G3P_antiterm; SSF110391 G3P_antiterm

EC number: NA

Molecular weight: Translated: 20787; Mature: 20655

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIH
CCHHHHHHCCCEEEEEECCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEE
VDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNID
EEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH
KQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEECCHHHHHHHHCCEEEEEECC
TGVWTLAKKLL
CHHHHHHHHCC
>Mature Secondary Structure 
PLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIH
CHHHHHHCCCEEEEEECCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEE
VDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNID
EEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH
KQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEECCHHHHHHHHCCEEEEEECC
TGVWTLAKKLL
CHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503