| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yfbJ
Identifier: 218695861
GI number: 218695861
Start: 2574915
End: 2575301
Strand: Direct
Name: yfbJ
Synonym: EC55989_2506
Alternate gene names: 218695861
Gene position: 2574915-2575301 (Clockwise)
Preceding gene: 218695860
Following gene: 218695871
Centisome position: 49.95
GC content: 48.32
Gene sequence:
>387_bases ATGGGCCTGATGTGGGGATTATTCAGCGTCATTATTGCCTCAGTTGCGCAATTAAGCCTGGGTTTTGCGGCGAGTCATCT GCCGCCGATGACGCACTTATGGGATTTTATCGCGGCTCTGTTAGCTTTTGGCCTGGATGCCCGGATACTGTTACTCGGGC TGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTACATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTC AGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACT GGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCATGACAAAACAACGTTACTGA
Upstream 100 bases:
>100_bases TGGCTGCAGTAAAACTGTGGCACGAACCGGTATCGCCGCGTCACTGGTGTGGGGTGGCGTTCATTATTGGTGGCATTGTG ATCCTCGGGAGTACGGTGTA
Downstream 100 bases:
>100_bases GTTTTCCGTGCCACTTTACACTGCCGTTCCCACTCATCGGGGCTATAACTGCTTGCCGAGAGGACTTTCACCGTATGCAG CTTTTCACGATTAATACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF [H]
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALL SMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPMTKQRY
Sequences:
>Translated_128_residues MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALL SMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPMTKQRY >Mature_127_residues GLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLS MSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPMTKQRY
Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArnF family [H]
Homologues:
Organism=Escherichia coli, GI87082075, Length=128, Percent_Identity=99.21875, Blast_Score=246, Evalue=3e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022832 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14115; Mature: 13984
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LPMTKQRY HHHHHCCC >Mature Secondary Structure GLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLS CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LPMTKQRY HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA