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The map label for this gene is spr

Identifier: 218695790

GI number: 218695790

Start: 2485379

End: 2485945

Strand: Direct

Name: spr

Synonym: EC55989_2429

Alternate gene names: 218695790

Gene position: 2485379-2485945 (Clockwise)

Preceding gene: 218695789

Following gene: 218695791

Centisome position: 48.21

GC content: 46.56

Gene sequence:

>567_bases
ATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATCCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATG
TAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGTAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTC
AGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTA
CGTTATCGTCTCGGCGGCAGCACTAAAAAAGGTATCGATTGTTCTGGTTTCGTACAGCGTACATTCCGTGAGCAATTTGG
CTTAGAACTTCCACGTTCGACTTACGAACAGCAGGAAATGGGTAAATCTGTTTCCCGCAGTAATTTGCGTACGGGTGATT
TAGTTCTGTTCCGTGCCGGTTCAACGGGACGCCATGTCGGTATTTATATCGGCAACAATCAGTTTGTCCATGCTTCCACC
AGCAGTGGTGTTATTATTTCCAGCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCG
CAGCTAA

Upstream 100 bases:

>100_bases
AAGGAATTGTTTCAACATGCCCAGGTAATTAGTCTCGTGTCGCTTGGCATTTTTTTATAACGATATTTGTCGTTAAGGAC
TTCAAGGGAAAACAAACAAC

Downstream 100 bases:

>100_bases
TAAACCGTTTGGATGCAATCCCTTGGCTATCCTGACGAGTTAACTGAAAGCACTGCTTAGGCAGTGCTTTTTTGTTTTCA
TTCATCAGAGAAAATGATGT

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRVVGSETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGV
RYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
SSGVIISSMNEPYWKKRYNEARRVLSRS

Sequences:

>Translated_188_residues
MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRVVGSETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGV
RYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
SSGVIISSMNEPYWKKRYNEARRVLSRS
>Mature_188_residues
MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRVVGSETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGV
RYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
SSGVIISSMNEPYWKKRYNEARRVLSRS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=188, Percent_Identity=99.468085106383, Blast_Score=389, Evalue=1e-109,
Organism=Escherichia coli, GI1788001, Length=127, Percent_Identity=48.0314960629921, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1787944, Length=122, Percent_Identity=36.0655737704918, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786421, Length=114, Percent_Identity=34.2105263157895, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 21068; Mature: 21068

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRVVGSETSSLQASQDEFENL
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHCCCCHHEECCCCCCCCCCHHHHHHH
VRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEM
HHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNE
HHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCCCHHHHHHHH
ARRVLSRS
HHHHHCCC
>Mature Secondary Structure
MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRVVGSETSSLQASQDEFENL
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHCCCCHHEECCCCCCCCCCHHHHHHH
VRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEM
HHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNE
HHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCCCHHHHHHHH
ARRVLSRS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]