Click here to switch to the map view.

The map label for this gene is yehB

Identifier: 218695727

GI number: 218695727

Start: 2417332

End: 2419812

Strand: Reverse

Name: yehB

Synonym: EC55989_2364

Alternate gene names: 218695727

Gene position: 2419812-2417332 (Counterclockwise)

Preceding gene: 218695728

Following gene: 218695726

Centisome position: 46.94

GC content: 45.51

Gene sequence:

>2481_bases
ATGTTGAGAATGACCCCACTTGCATCAGCAATCGTAGCGTTATTGCTCGGCATTGAAGCTTATGCAGCTGAAGAAACCTT
TGATACCCATTTTATGATAGGTGGAATGAAAGACCAGCAGGTTGCAAATATTCGTCTTGATGATAATCAACCCTTACCGG
GGCAGTATGACATCGATATTTATGTCAATAAGCAATGGCGCGGGAAATATGAGATTATTGTTAAAGACAACCCGCAAGAA
ACATGTTTATCAATAGAAGTTATCAAGCGGTTAGGCATTAATAGCGATAACTTCGCCAGCGGTAAGCAATGTTTAACATT
TGAGCAACTTGTTCAGGGTGGGAGCTATACCTGGGATATCGGGGTTTTTCGTCTCGATTTCAGTGTCCCGCAGGCCTGGG
TGGAAGAACTGGAAAGTGGCTATGTTCCACCGGAAAACTGGGAGCGGGGTATTAATGCGTTTTATACCTCTTATTATGTG
AGTCAGTATTACAGTGACTATAAAGCGTCGGGTAATAGTAAGAGTACATATGTACGTTTTAACAGCGGGTTAAATTTACT
GGGGTGGCAACTGCATTCTGATGCCAGTTTCAGTAAAACAAATAACAATCCAGGGGTGTGGAAAAGCAATACCCTGTATC
TGGAACGTGGATTTGCCCAACTTCTCGGCACGCTTCGCGTGGGTGATATGTACACATCAAGCGATATTTTTGATTCTGTT
CGCTTCAGCGGTGTGCGGTTGTTTCGTGATATGCAGATGTTGCCTAACTCGAAACAAAATTTTACGCCACGGGTGCAGGG
GATTGCTCAGAGTAATGCGCTGGTAACTATTGAACAGAACGGTTTTGTGGTTTATCAGAAAGAGGTTCCTCCTGGCCCGT
TCGCGATTACAGATTTGCAGTTGGCCGGTGGTGGAGCAGATCTTGATGTCAGCGTGAAAGAGGCGGACGGCTCGGTAACC
ACCTATCTGGTGCCTTATGCAGCAGTGCCAAATATGCTGCAACCCGGCGTATCGAAATATGATTTTGCGGCGGGTCGTAG
CCATATTGAAGGGGCGAGCAAACAAAGTGATTTTGTCCAGGCGGGTTATCAGTATGGTTTTAATAATTTATTGACGCTGT
ATGGTGGCTCGATGGTCGCGAATAATTATTACGCGTTTACTTTGGGGACTGGCTGGAATACACGCATTGGTGCCATTTCC
GTCGATGCCACGAAGTCGCATAGTAAACAAGACAACGGCGATGTGTTTGACGGGCAAAGTTATCAAATTGCCTACAACAA
ATTTGTGAGCCAAACGTCGACGCGTTTTGGTCTGGCGGCCTGGCGTTATTCATCGCGTGATTACCGGACATTTAATGATC
ACGTTTGGGCAAACAATAAAGATAATTATCGCCGTGATGAAAACGATGTCTATGACATTGCCGATTATTACCAGAACGAT
TTTGGCCGTAAAAATAGCTTCTCTGCCAATATGAGCCAGTCATTGCCAGAAGGCTGGGGGTCTGTGTCCTTAAGTACGTT
ATGGCGAGATTACTGGGGGCGTAGCGGCAGCAGTAAGGATTATCAGTTGAGTTATTCCAATAACTGGCGGCGGATAAGCT
ATATCCTCGCGGCAAGCCAGGCGTATGACGAGAATCATCATGAAGAGAAACGTTTTAATATTTTTATATCGATTCCCTTT
GATTGGGGTGATGACGTTACGACGCCTCGTCGGCAAATATATATGTCTAACTCAACGACGTTTGATGATCAGGGGTTTGC
CTCAAATAATACGGGATTATCAGGAACCGTTGGAAGCCGGGATCAGTTTAACTATGGGGTCAACCTGAGTTATCAGAATC
AGGGAAATGAAACGACAGCTGGGGCGAATTTGACCTGGAACGCGCCGGTTGCGACAGTGAATGGCAGTTATAGTCAGTCA
AGTACTTATCGACAGGCTGGAGCCAGTGTTTCAGGGGGCATTGTCGCCTGGTCGGGGGGCGTTAATCTGGCGAACCGTCT
TTCCGAAACGTTTGCTGTGATGAATGCGCCAGGAATTAAAGATGCTTATGTCAATGGGCAAAAATATCGCACAACAAACC
GTAATGGAGTGGTGGTATACGACGGAATGACACCTTATCGGGAAAATCACCTGATGCTGGATGTGTCGCAAAGCGATAGC
GAAGCAGAATTACGTGGCAACCGGAAAATTGCCGCCCCTTATCGCGGCGCGGTTGTACTGGTTAATTTTGATACCGATCA
GCGCAAGCCCTGGTTTATTAAAGAGTTAAGAGCGGATGGTCAACCATTAATGTTTGGTTATGAAGTCAATGATATCCATG
GTCATAATATTGGCGTTGTCGGCCAGGGAAGCCAGTTATTTATTCGCACCAATGAAGTACCGCCATCGGTTAATGTGGCA
ATTGATAAGCAACAAGGACTTTCATGCACAATCACCTTCGGTAAAGAGATTGATGAAAGTAGAAATTATATTTGCCAGTA
A

Upstream 100 bases:

>100_bases
TGTTAATGTCAAAAGTAATAATGCAAATAACTGGTATCTGACCATTATCGATGACCACGGCAACTATATTAGTGACAAAA
TTTAATTGCAGGAGCTGCCT

Downstream 100 bases:

>100_bases
TAGTCAGGTGGTTCTATGGAAATTCGCATAATGCTATTTATATTAATGATGATGGTTATGCCTGTGAGCTATGCGGCATG
TTATAGTGAGTTATCTGTTC

Product: conserved hypothetical protein; putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 826; Mature: 826

Protein sequence:

>826_residues
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSIEVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYV
SQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGTGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYILAASQAYDENHHEEKRFNIFISIPF
DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSYQNQGNETTAGANLTWNAPVATVNGSYSQS
STYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKELRADGQPLMFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ

Sequences:

>Translated_826_residues
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSIEVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYV
SQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGTGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYILAASQAYDENHHEEKRFNIFISIPF
DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSYQNQGNETTAGANLTWNAPVATVNGSYSQS
STYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKELRADGQPLMFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ
>Mature_826_residues
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSIEVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYV
SQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGTGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYILAASQAYDENHHEEKRFNIFISIPF
DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSYQNQGNETTAGANLTWNAPVATVNGSYSQS
STYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKELRADGQPLMFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1788427, Length=826, Percent_Identity=98.18401937046, Blast_Score=1678, Evalue=0.0,
Organism=Escherichia coli, GI1786332, Length=842, Percent_Identity=32.4228028503563, Blast_Score=402, Evalue=1e-113,
Organism=Escherichia coli, GI1790772, Length=858, Percent_Identity=29.4871794871795, Blast_Score=357, Evalue=1e-99,
Organism=Escherichia coli, GI1787172, Length=823, Percent_Identity=31.1057108140948, Blast_Score=351, Evalue=1e-97,
Organism=Escherichia coli, GI1786744, Length=830, Percent_Identity=30.4819277108434, Blast_Score=318, Evalue=6e-88,
Organism=Escherichia coli, GI1789533, Length=790, Percent_Identity=27.5949367088608, Blast_Score=295, Evalue=6e-81,
Organism=Escherichia coli, GI87081778, Length=575, Percent_Identity=28.3478260869565, Blast_Score=198, Evalue=1e-51,
Organism=Escherichia coli, GI1789610, Length=835, Percent_Identity=24.0718562874251, Blast_Score=123, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92380; Mature: 92380

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEE
YVNKQWRGKYEIIVKDNPQETCLSIEVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDI
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCEEEEE
GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRF
EEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
NSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHEECCEECCHHHHHHH
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ
HHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEE
LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ
EECCCCCEEEEEEECCCCEEEEEEEHHHCCHHHCCCCCCHHHHCCCHHHCCCCCCHHHHH
AGYQYGFNNLLTLYGGSMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS
HHHHHCCCCEEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEECCCC
YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
EEEHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYILAASQ
CCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEEHH
AYDENHHEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSR
HHCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DQFNYGVNLSYQNQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGG
CCCCCCEEEEECCCCCCEECCCEEEECCCEEEECCCCCCCCHHHHCCCCCCCCEEEEECC
VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
CHHHHHHHHHHHHHCCCCCCHHEECCCEEEECCCCCEEEECCCCCCCCCEEEEEECCCCC
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKELRADGQPLMFGYEVNDIHGHNIGVV
CHHHCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCEEEEE
GQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ
ECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEE
YVNKQWRGKYEIIVKDNPQETCLSIEVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDI
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCEEEEE
GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRF
EEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
NSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHEECCEECCHHHHHHH
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ
HHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEE
LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ
EECCCCCEEEEEEECCCCEEEEEEEHHHCCHHHCCCCCCHHHHCCCHHHCCCCCCHHHHH
AGYQYGFNNLLTLYGGSMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS
HHHHHCCCCEEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEECCCC
YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
EEEHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYILAASQ
CCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEEHH
AYDENHHEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSR
HHCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DQFNYGVNLSYQNQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGG
CCCCCCEEEEECCCCCCEECCCEEEECCCEEEECCCCCCCCHHHHCCCCCCCCEEEEECC
VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
CHHHHHHHHHHHHHCCCCCCHHEECCCEEEECCCCCEEEECCCCCCCCCEEEEEECCCCC
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKELRADGQPLMFGYEVNDIHGHNIGVV
CHHHCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCEEEEE
GQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ
ECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]