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The map label for this gene is yehC

Identifier: 218695728

GI number: 218695728

Start: 2419828

End: 2420502

Strand: Reverse

Name: yehC

Synonym: EC55989_2365

Alternate gene names: 218695728

Gene position: 2420502-2419828 (Counterclockwise)

Preceding gene: 218695729

Following gene: 218695727

Centisome position: 46.96

GC content: 39.26

Gene sequence:

>675_bases
ATGAAAGGATTATTATCTTTACTCATTTTTTCTATGGTCCTTCCTGCACATGCCGGAATTGTTATCTACGGGACGCGCAT
TATTTACCCGGCAGAAAATAAAGAAGTTATGGTGCAGTTGATGAACCAGGGAAACCGTTCTTCGCTGCTGCAGGCGTGGA
TTGATGATGGCGATACGTCGTTACCACCAGAAAAAATTCAGGTTCCTTTCATGTTAACGCCACCAGTGGCAAAAATAGGG
GCAAATTCCGGGCAGCAAGTAAAAATCAAAATTATGCCGAATAAACTGCCCACTAATAAAGAAAGCATTTTTTATCTGAA
TGTTCTGGATATTCCACCAAATAGTCCAGAACAAGAAGGTAAGAATGCACTGAAGTTTGCGATGCAAAACAGAATCAAAT
TGTTTTACCGCCCGGCGGGTATTGCTCCGGTAAATAAAGCGACCTTTAAAAAGTTACTGGTAAGTCGCAGTGGCAATGGA
TTGGTGATAAAAAATGACTCAGCTAATTGGGTGACGATTTCGGATGTCAAAGCTAATAATGTCAAAGTCAATTATGAAAC
TATAATGATTGCCCCCTTAGAAAGTCAGAGTGTTAATGTCAAAAGTAATAATGCAAATAACTGGTATCTGACCATTATCG
ATGACCACGGCAACTATATTAGTGACAAAATTTAA

Upstream 100 bases:

>100_bases
TGCGTGTGGCGCAGGATTAATAAATAAAATTGCAAGTTTCTCCAGGTAATAAACATGGCCGCTATCCCCATGGCGGCTTT
TTAATTTAAGAGGCATTAAG

Downstream 100 bases:

>100_bases
TTGCAGGAGCTGCCTATGTTGAGAATGACCCCACTTGCATCAGCAATCGTAGCGTTATTGCTCGGCATTGAAGCTTATGC
AGCTGAAGAAACCTTTGATA

Product: putative membrane-associated pilin chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG
ANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVSRSGNG
LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWYLTIIDDHGNYISDKI

Sequences:

>Translated_224_residues
MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG
ANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVSRSGNG
LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWYLTIIDDHGNYISDKI
>Mature_224_residues
MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIG
ANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVSRSGNG
LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWYLTIIDDHGNYISDKI

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1788428, Length=224, Percent_Identity=99.1071428571429, Blast_Score=447, Evalue=1e-127,
Organism=Escherichia coli, GI1786333, Length=217, Percent_Identity=36.8663594470046, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1789532, Length=217, Percent_Identity=31.3364055299539, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1786936, Length=222, Percent_Identity=30.6306306306306, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788677, Length=201, Percent_Identity=34.8258706467662, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1790771, Length=219, Percent_Identity=28.310502283105, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1786743, Length=221, Percent_Identity=30.316742081448, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787171, Length=227, Percent_Identity=25.5506607929515, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87082203, Length=222, Percent_Identity=27.4774774774775, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI87081806, Length=184, Percent_Identity=26.6304347826087, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 24836; Mature: 24836

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTS
CHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCC
LPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEG
CCHHHEEEEEEECCCHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHH
KNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVSRSGNGLVIKNDSANWVTISDVKANN
HHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCC
VKVNYETIMIAPLESQSVNVKSNNANNWYLTIIDDHGNYISDKI
EEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTS
CHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCC
LPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEG
CCHHHEEEEEEECCCHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHH
KNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVSRSGNGLVIKNDSANWVTISDVKANN
HHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCC
VKVNYETIMIAPLESQSVNVKSNNANNWYLTIIDDHGNYISDKI
EEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]