Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is yobG
Identifier: 218695389
GI number: 218695389
Start: 2059030
End: 2059173
Strand: Reverse
Name: yobG
Synonym: EC55989_2000
Alternate gene names: 218695389
Gene position: 2059173-2059030 (Counterclockwise)
Preceding gene: 218695393
Following gene: 218695388
Centisome position: 39.95
GC content: 46.53
Gene sequence:
>144_bases GTGAAAAAGTTTCGATGGGTCGTTCTGGTTGTCGTGGTGTTGGCTTGCTTGCTGCTTTGGGCGCAGGTATTCAACATGAT GTGCGATCAGGATGTACAATTTTTCAGCGGAATTTGTGCCATTAACCAGTTTATCCCGTGGTGA
Upstream 100 bases:
>100_bases GCTACTCATTCCGAAAAAGCACGAATATCGACATAGTTAGGCGCTGTTTAACTAACGCATGCTAGTTTAATGACATAAGG TAGGTGAAGCGGAGATTGGA
Downstream 100 bases:
>100_bases TATCATTTTTTCAGCACTAGATTTTCTTCCTCTCCAGCAGTGGTAGAATAGCGCCTCTACTCAGAGGTGGTGAAATGAAC GAAGTTGTAAATTCAGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQFIPW
Sequences:
>Translated_47_residues MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQFIPW >Mature_47_residues MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQFIPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mgrB family
Homologues:
Organism=Escherichia coli, GI1788130, Length=47, Percent_Identity=100, Blast_Score=95, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MGRB_ECO24 (A7ZMU8)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001463127.1 - ProteinModelPortal: A7ZMU8 - STRING: A7ZMU8 - EnsemblBacteria: EBESCT00000021527 - GeneID: 5590304 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_2054 - eggNOG: NOG15488 - GeneTree: EBGT00050000011787 - HOGENOM: HBG416059 - ProtClustDB: PRK10299 - BioCyc: ECOL331111:ECE24377A_2054-MONOMER - HAMAP: MF_01596 - InterPro: IPR020907
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5552; Mature: 5552
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 12.8 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 12.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQFIPW CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQFIPW CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA