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The map label for this gene is ydjI

Identifier: 218695332

GI number: 218695332

Start: 2005364

End: 2006200

Strand: Reverse

Name: ydjI

Synonym: EC55989_1942

Alternate gene names: 218695332

Gene position: 2006200-2005364 (Counterclockwise)

Preceding gene: 218695333

Following gene: 218695331

Centisome position: 38.92

GC content: 45.4

Gene sequence:

>837_bases
ATGCTCGCAGATATCAGATATTGGGAAAACGATGCCACAAATAAACATTATGCAATTGCCCATTTTAACGTATGGAATGC
AGAAATGTTGATGGGCGTTATCGACGCAGCCGAAGAAGCGAAATCCCCGGTTATTATTTCTTTTGGTACAGGTTTTGTCG
GTAACACCTCATTTGAAGATTTCTCTCACATGATGGTATCAATGGCACAAAAAGCAACGGTGCCGGTAATAACTCATTGG
GATCATGGTCGGAGTATGGAGATTATTCATAACGCCTGGACTCATGGTATGAATTCATTAATGCGTGATGCTTCCGCGTT
TGATTTCGAAGAAAATATTCGTTTAACCAAAGAGGCTGTCGATTTCTTCCATCCGCTGGGTATTCCGGTAGAGGCGGAAT
TAGGGCATGTCGGTAATGAAACCGTTTATGAGGAAGCGCTGGCGGGCTATCACTATACCGATCCTGACCAGGCGGCTGAA
TTTGTTGAACGTACGGGCTGTGATTCATTGGCTGTCGCCATCGGCAACCAGCATGGGGTTTATACGTCAGAGCCACAATT
GAACTTTGAGGTCGTCAAACGCGTACGCGATGCCGTTTCTGTTCCGCTGGTTTTGCACGGTGCATCGGGGATCAGTGATG
CCGACATTAAAACTGCAATTTCGTTGGGTATCGCGAAAATCAACATTCATACGGAGCTCTGTCAGGCCGCAATGGTTGCA
GTGAAAGAAAACCAGGATCAGCCTTTCCTGCATTTAGAACGTGAAGTACGTAAAGCTGTAAAAGAACGGGCATTGGAAAA
AATTAAACTGTTCGGTTCTGATGGCAAAGCGGAATAA

Upstream 100 bases:

>100_bases
GGGATGTACAACAGGCATTTGAAGAGTCAGTTAACAACAAACGCGACATTATTAAAGGCGTTATTAAAATTAGCGATTAA
TTAATACGGGAGAACAGAAC

Downstream 100 bases:

>100_bases
TGATATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTGCAACCGGTCAGTAAAAATATCT
TTGATGTGGATTCTTATCCT

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHW
DHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE
FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA
VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE

Sequences:

>Translated_278_residues
MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHW
DHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE
FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA
VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
>Mature_278_residues
MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHW
DHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAE
FVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA
VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE

Specific function: Unknown

COG id: COG0191

COG function: function code G; Fructose/tagatose bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788072, Length=278, Percent_Identity=100, Blast_Score=577, Evalue=1e-166,
Organism=Escherichia coli, GI1789526, Length=279, Percent_Identity=36.9175627240143, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI87082041, Length=234, Percent_Identity=42.3076923076923, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI1789293, Length=273, Percent_Identity=24.5421245421245, Blast_Score=68, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6322790, Length=284, Percent_Identity=25.7042253521127, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDJI_ECOLI (P77704)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   E64937
- RefSeq:   AP_002392.1
- RefSeq:   NP_416287.1
- ProteinModelPortal:   P77704
- SMR:   P77704
- DIP:   DIP-28071N
- STRING:   P77704
- EnsemblBacteria:   EBESCT00000003713
- EnsemblBacteria:   EBESCT00000014579
- GeneID:   946291
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1762
- KEGG:   eco:b1773
- EchoBASE:   EB3258
- EcoGene:   EG13485
- eggNOG:   COG0191
- GeneTree:   EBGT00050000009021
- HOGENOM:   HBG327581
- OMA:   TIKAGKE
- ProtClustDB:   CLSK880191
- BioCyc:   EcoCyc:G6960-MONOMER
- Genevestigator:   P77704
- GO:   GO:0006096
- InterPro:   IPR013785
- InterPro:   IPR000771
- Gene3D:   G3DSA:3.20.20.70
- PIRSF:   PIRSF001359
- TIGRFAMs:   TIGR00167

Pfam domain/function: PF01116 F_bP_aldolase

EC number: NA

Molecular weight: Translated: 30810; Mature: 30810

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFED
CCCCCEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH
FSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAV
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGV
HHHHCCCCCEEHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCE
YTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA
ECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCEEEEEHHHHHHHHHHHH
VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFED
CCCCCEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH
FSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAV
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGV
HHHHCCCCCEEHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCE
YTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA
ECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCEEEEEHHHHHHHHHHHH
VKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503