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The map label for this gene is yadH

Identifier: 218693594

GI number: 218693594

Start: 143755

End: 144525

Strand: Direct

Name: yadH

Synonym: EC55989_0122

Alternate gene names: 218693594

Gene position: 143755-144525 (Clockwise)

Preceding gene: 218693593

Following gene: 218693595

Centisome position: 2.79

GC content: 50.58

Gene sequence:

>771_bases
ATGATGCATCTTTACTGGGTGGCGCTAAAAAGCATCTGGGCGAAAGAGATCCATCGCTTTATGCGTATCTGGGTGCAGAC
GCTGGTGCCGCCAGTCATCACCATGACCCTTTACTTTATTATCTTCGGTAACCTGATTGGTTCGCGTATTGGCGATATGC
ATGGCTTCAGCTATATGCAGTTCATCGTACCGGGGCTGATCATGATGTCGGTGATCACCAATGCCTACGCCAACGTTGCG
TCATCATTTTTTGGTGCCAAGTTCCAGCGTAATATTGAAGAGCTGCTGGTAGCGCCGGTTCCGACTCACGTCATTATTGC
CGGATATGTCGGCGGTGGCGTGGCGCGTGGTCTGTTTGTTGGCATTCTGGTGACGGCAATTTCACTGTTTTTTGTGCCGT
TTCAGGTGCATTCGTGGGTATTCGTTGCCTTAACCCTGGTGCTCACGGCGGTGTTGTTCTCCCTTGCGGGTTTGCTGAAC
GGTGTGTTTGCCAAAACGTTCGATGACATCAGCCTGGTGCCAACCTTTGTGTTAACGCCACTCACGTATTTGGGTGGGGT
CTTTTACTCACTGACTTTGTTGCCGCCGTTCTGGCAAGGGCTGTCGCACCTGAACCCAATCGTTTATATGATCAGTGGTT
TCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACTTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTT
TATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAA

Upstream 100 bases:

>100_bases
TAAGTGAGCAGGGCATTCAGGTATTAAGTATGCGTAACAAAGCTAACCGTCTGGAAGAGCTGTTTGTTTCACTGGTTAAT
GAAAAACAAGGAGATCGCGC

Downstream 100 bases:

>100_bases
GGCTATTTCCTCTCCTCTGGATTTGGGGGAGAGGAGTTTTGACGGCTATCACCCTTTATCAACAATGGTCAGGGTAGACT
GATTTTCGGCTAAGGAGGAA

Product: putative transporter subunit: membrane component of ABC superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVA
SSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAF
YLICWSLIQRGRGLRS

Sequences:

>Translated_256_residues
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVA
SSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAF
YLICWSLIQRGRGLRS
>Mature_256_residues
MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVA
SSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAF
YLICWSLIQRGRGLRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=100, Blast_Score=505, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YADH_ECO57 (P0AFN8)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D85496
- PIR:   D90645
- RefSeq:   NP_285824.1
- RefSeq:   NP_308159.1
- ProteinModelPortal:   P0AFN8
- EnsemblBacteria:   EBESCT00000027778
- EnsemblBacteria:   EBESCT00000059478
- GeneID:   913717
- GeneID:   956833
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z0139
- KEGG:   ecs:ECs0132
- GeneTree:   EBGT00050000010768
- HOGENOM:   HBG733815
- OMA:   ANPVLHM
- ProtClustDB:   PRK15066
- BioCyc:   ECOL83334:ECS0132-MONOMER
- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525
- PRINTS:   PR00164

Pfam domain/function: PF01061 ABC2_membrane

EC number: NA

Molecular weight: Translated: 28517; Mature: 28517

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17426050)-; HASH(0x171464e8)-; HASH(0x168fb0ac)-; HASH(0x1730ddf4)-; HASH(0x17424044)-; HASH(0x168f86f4)-; HASH(0x175883f0)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCH
>Mature Secondary Structure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HHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796