Click here to switch to the map view.

The map label for this gene is rhaT [H]

Identifier: 218692192

GI number: 218692192

Start: 4550885

End: 4551919

Strand: Reverse

Name: rhaT [H]

Synonym: ECED1_4609

Alternate gene names: 218692192

Gene position: 4551919-4550885 (Counterclockwise)

Preceding gene: 218692196

Following gene: 218692189

Centisome position: 87.38

GC content: 52.46

Gene sequence:

>1035_bases
ATGAGTAACGCGATTACGATGGGGATATTTTGGCATTTGATCGGCGCGGCCAGTGCAGCCTGTTTTTACGCTCCGTTCAA
AAAAGTAAAAAAATGGTCATGGGAAACCATGTGGTCAGTCGGTGGGATTGTTTCGTGGATTATCCTGCCGTGGGCCATCA
GCGCCCTGTTACTACCGAATTTCTGGGCGTATTACAGCTCGTTTAGTCTCTCTACGCTGCTGCCTGTTTTTCTGTTCGGC
GCTATGTGGGGGATCGGTAATATCAACTACGGCCTGACCATGCGTTATCTCGGCATGTCGATGGGAATTGGCATCGCCAT
TGGCATTACGTTGATTGTCGGTACGCTGATGACGCCAATTATCAACGGCAATTTCGATGTGCTGATTAATACCGAAGGCG
GACGCATGACGTTGCTCGGCGTTCTGGTGGCGCTGATTGGCGTAGGGATTGTAACTCGCGCCGGGCAGTTGAAAGAGCGC
AAGATGGGCATTAAAGCCGAAGAGTTCAATCTGAAAAAAGGGCTGGTGCTGGCGGTGATGTGCGGCATTTTCTCTGCCGG
GATGTCCTTTGCGATGAACGCCGCAAAACCGATGCATGAAGCCGCTGCCGCGCTGGGCGTCGATCCCCTGTATGTCGCTC
TGCCAAGCTATGTTGTCATCATGGGCGGCGGCGCAATCATCAACCTCGGCTTCTGCTTCATTCGTCTGGCAAAAGTGAAA
GATTTGTCGCTAAAAGCCGACTTCTCGCTGGCAAAACCGCTGATCATTCACAATGTGTTACTCTCAGCACTGGGCGGGTT
GATGTGGTATCTGCAATTCTTTTTCTATGCCTGGGGCCACGCCCGCATTCCGGCGCAGTATGACTACATCAGCTGGATGC
TGCATATGAGCTTCTATGTATTGTGCGGCGGTATCGTCGGGCTGGTGCTGAAAGAGTGGAACAATGCAGGACGCCGTCCG
GTAACGGTGTTGAGCCTCGGTTGTGTGGTGATTATTGTCGCCGCTAACATCGTCGGCATCGGCATGGCGAATTAA

Upstream 100 bases:

>100_bases
CGGCAGCGGCGGCAACAGGCGAAAGGTTAATCGACAGCTCAATTTTTACACTCATCTCGTCGGAGATATGACGCGACGAA
AAAATGATGAGGATAAGAAG

Downstream 100 bases:

>100_bases
TCTTTCTGCGAATTGAGATGACGCCACTGGCTGGGCGTCATCCCGGTTTCCCGGGTAAACACCACCGAAAAATAGTTACT
ATCTTCAAAGCCACATTCGG

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVK
DLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRP
VTVLSLGCVVIIVAANIVGIGMAN

Sequences:

>Translated_344_residues
MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFG
AMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKER
KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVK
DLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRP
VTVLSLGCVVIIVAANIVGIGMAN
>Mature_343_residues
SNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGA
MWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERK
MGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVKD
LSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPV
TVLSLGCVVIIVAANIVGIGMAN

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family [H]

Homologues:

Organism=Escherichia coli, GI1790341, Length=344, Percent_Identity=98.8372093023256, Blast_Score=675, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004673
- InterPro:   IPR010476 [H]

Pfam domain/function: PF06379 RhaT [H]

EC number: NA

Molecular weight: Translated: 37284; Mature: 37153

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
INGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVM
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHCCHHHHHHHHH
CGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVK
HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
DLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYV
CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVAANIVGIGMAN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA