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The map label for this gene is rhaB [H]

Identifier: 218692189

GI number: 218692189

Start: 4547373

End: 4548842

Strand: Reverse

Name: rhaB [H]

Synonym: ECED1_4605

Alternate gene names: 218692189

Gene position: 4548842-4547373 (Counterclockwise)

Preceding gene: 218692192

Following gene: 218692188

Centisome position: 87.32

GC content: 54.56

Gene sequence:

>1470_bases
ATGACCTTTCGCAATTGTGTCGCCGTCGATCTCGGCGCATCCAGTGGGCGCGTGATGCTGGCGCGTTACGAGCGTGAATG
CCGCAGCCTGACGCTGCGCGAAATCCATCGTTTTAACAATGGCCTGCATAGCCAGAACGGTTATGTCACCTGGAATGTGG
ATAGCCTGGAAAGTGCCATTCGCCTTGGATTAAACAAGGTGTGCGAGGAAGGGATTCGTATCGATAGCATTGGGATTGAT
ACCTGGGGCGTGGACTTTGTGCTGCTCGACCAACAGGGTCAGCGTGTGGGCCTGCCCGTTGCTTATCGCGATAGCCGCAC
CAATGGCCTAATGGCGCAGGCACAACAACAACTCGGCAAACGCGATATTTATCAACGTAGCGGCATCCAGTTTCTGCCCT
TCAATACGATCTATCAGCTACGTGCACTGACAGAGCAGCAACCAGAACTTATTCCACACATTGCTCACGCTTTGCTGATA
CCGGATTACTTTAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATAT
CAATAGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGTGCCAACAAAGCCTGGTTTGGTCGCCCGACGCATCCGG
GTAATGTCATAGGTCACTGGATTTGCCCGCAGGGTAATGAGATTCCGGTGGTCGCCGTTGCCAGCCATGATACCGCCAGC
GCGGTTATCGCCTCGCCGTTAAACGGTTCACGCGCCGCTTATCTCTCTTCTGGCACCTGGTCATTGATGGGCTTCGAAAG
CCAGACGCCATTTACCAATGACACGGCGCTGGCAGCCAATATCACCAATGAAGGCGGGGCGGAAGGTCGCTATCGGGTGC
TGAAAAATATTATGGGCTTATGGCTGCTTCAGCGAGTGCTTCAGGAGCGGCAAATCAACGATCTTCCGGCGCTTATCGCC
GCAACACAGGCACTTCCGGCCTGCCGCTTCATCATCAATCCCAATGACGATCGCTTTATTAATCCTGACGAGATGTGCAG
CGAAATTCAGGCTGCGTGTCGGGAAACGGCGCAACCGATCCCGGAAAGTGATGCTGAACTGGCGCGCTGTATTTTCGACA
GTCTGGCGCTGCTGTATGCCGATGTGTTGCATGAGCTGGCGCAGCTGCGTGGTGAAGATTTCTCGCAACTGCATATTGTC
GGCGGCGGCTGCCAGAACACGCTGCTCAACCAGCTGTGTGCCGATGCCTGCGGTATTCGGGTGATCGCAGGGCCTGTTGA
AGCCTCGACGCTCGGCAATATCGGCATCCAGTTAATGACGCTGGATGAACTCAACAATGTGGATGATTTCCGTCAGGTCG
TCAGCACTACCGCGAATCTGACCACCTTTACCCCTAATCCTGACAGTGAAATTGCCCACTATGTGGCGCAGATTCACTCT
ACACGACAGACAAAGGAGCTTTGCGCATGA

Upstream 100 bases:

>100_bases
TCCCTGGTTGCCAATGGCCCATTTTCCTGTCAGTAACGAGAAGGTCACGAATTCAGGCGCTTTTTAGACTGGTCGTAATG
AAATTCAGCAGGATCACATT

Downstream 100 bases:

>100_bases
CCACTCAACTGGAACAGGCCTGGGAGCTGGCGAAACAGCGTTTCGCGGCAGTAGGGATTGATGTCGAGGAGGCACTGCGC
CAACTTGATCGTTTACCCGT

Product: rhamnulokinase

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGID
TWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTIYQLRALTEQQPELIPHIAHALLI
PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS
AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIA
ATQALPACRFIINPNDDRFINPDEMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIV
GGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHS
TRQTKELCA

Sequences:

>Translated_489_residues
MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGID
TWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTIYQLRALTEQQPELIPHIAHALLI
PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS
AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIA
ATQALPACRFIINPNDDRFINPDEMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIV
GGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHS
TRQTKELCA
>Mature_488_residues
TFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDT
WGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTIYQLRALTEQQPELIPHIAHALLIP
DYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASA
VIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAA
TQALPACRFIINPNDDRFINPDEMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVG
GGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHST
RQTKELCA

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=489, Percent_Identity=98.5685071574642, Blast_Score=1003, Evalue=0.0,
Organism=Escherichia coli, GI1789168, Length=387, Percent_Identity=25.8397932816537, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 54077; Mature: 53945

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWNVDSLESAI
CCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH
RLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGK
HHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCEECCEEEECCCCCCHHHHHHHHHHHH
RDIYQRSGIQFLPFNTIYQLRALTEQQPELIPHIAHALLIPDYFSYRLTGKMNWEYTNAT
HHHHHHCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECEEECCCC
TTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS
EEEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC
AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGL
HHEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
WLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPDEMCSEIQAACRETAQPI
HHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
PESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCE
VIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHS
EEECCCCCCHHCCCCEEEEEHHHCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
TRQTKELCA
HHHHHHHCC
>Mature Secondary Structure 
TFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWNVDSLESAI
CCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH
RLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGK
HHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCEECCEEEECCCCCCHHHHHHHHHHHH
RDIYQRSGIQFLPFNTIYQLRALTEQQPELIPHIAHALLIPDYFSYRLTGKMNWEYTNAT
HHHHHHCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEECEEECCCC
TTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS
EEEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC
AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGL
HHEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
WLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPDEMCSEIQAACRETAQPI
HHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
PESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCE
VIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHS
EEECCCCCCHHCCCCEEEEEHHHCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
TRQTKELCA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA