Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is gpmI [H]
Identifier: 218691899
GI number: 218691899
Start: 4222399
End: 4223943
Strand: Direct
Name: gpmI [H]
Synonym: ECED1_4298
Alternate gene names: 218691899
Gene position: 4222399-4223943 (Clockwise)
Preceding gene: 218691893
Following gene: 218691900
Centisome position: 81.05
GC content: 52.88
Gene sequence:
>1545_bases ATGTCGGTTTCTAAAAAACCTATGGTACTGGTGATTCTGGATGGCTATGGCTATCGCGAAGAACAGCAGGATAACGCCAT TTTTAGTGCTAAAACCCCGGTAATGGATGCACTGTGGGCCAATCGTCCGCATACCCTGATCGACGCTTCCGGTCTGGAAG TCGGTCTGCCTGACCGTCAGATGGGCAACTCCGAAGTAGGCCACGTTAACCTGGGTGCCGGCCGCATCGTGTATCAGGAC CTGACTCGTCTGGACGTTGAAATCAAAGATCGCGCTTTCTTTGCTAATCCGGTGTTGACTGGTGCAGTAGATAAAGCGAA AAACGCAGGCAAAGCAATACACATTATGGGTCTGCTCTCCGCAGGTGGTGTACACAGCCACGAAGATCACATCATGGCGA TGGTAGAACTGGCAGCTGAACGCGGCGCAGAAAAAATCTACCTACACGCATTCCTTGACGGTCGCGACACTCCGCCGCGC AGTGCTGAATCCTCGCTGAAAAAATTCGAAGAGAAATTTGCCGCGCTGGGTAAAGGCCGCGTAGCGTCCATCATTGGTCG TTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTTGAAAAAGCTTATGACCTGCTGACTCTGGCGCAAGATGAGT TCCAGGCCGATACCGCCGTTGCCGGTTTGCAGGCTGCTTATGCTCGCGACGAAAACGACGAGTTCGTGAAAGCGACCGTT ATTCGTGCAGAAGGTCAGCCAGATGCGGCAATGGAAGACGGCGATGCGCTGATTTTCATGAACTTCCGTGCTGACCGCGC GCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATGGCTTCGCGCGTAAGAAAGTGGTTAACGTCGATTTCGTGA TGCTGACCGAATACGCTGCCGACATCAAAACCGCAGTGGCTTACCCACCCGCTTCCCTGGTTAACACCTTCGGCGAGTGG ATGGCGAAAAACGACAAAACTCAGCTGCGTATTTCCGAAACCGAAAAATATGCCCACGTTACTTTCTTCTTCAACGGTGG CGTAGAAGAGTCGTTTAAAGGCGAAGATCGCATTCTGATCAACTCACCGAAAGTGGCTACCTACGATCTGCAACCGGAAA TGAGCTCCGCAGAGCTGACCGAAAAACTGGTTGCGGCAATCAAGAGCGGCAAATACGACACCATTATCTGTAACTATCCG AACGGCGACATGGTAGGTCACACCGGAGTGATGGAAGCGGCGGTTAAAGCGGTTGAAGCGCTGGATCACTGCGTGGAAGA AGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAACAGATGCGCGATC CGGCAACGGGTCAGGCACACACAGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCG GTTGAAGGCGGCAAACTTTCTGACATCGCGCCGACCATGTTGTCGCTGATGGGTATGGAAATCCCGCAAGAGATGACTGG TAAGCCGCTGTTCATCGTGGAATAA
Upstream 100 bases:
>100_bases GCCGCGAGCGGTCGTATATTTTGATCTTCAGAGGCTATTTTATCGATTCAGCTGTAGTAAAATTACGCAAATTTTGACTC TTGAGTATGAGGTTGTCGCA
Downstream 100 bases:
>100_bases TCCCTCCCCATGAGGGGAAAGGCGATTAATACCATGACACGGGCCGTGAAACCGCGCAGGTTTGCAATCAGGCCCATCAT CTACGCCAGCGTTCTGAGCG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQD LTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAIHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQDEFQADTAVAGLQAAYARDENDEFVKATV IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEW MAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYP NGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA VEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE
Sequences:
>Translated_514_residues MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQD LTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAIHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQDEFQADTAVAGLQAAYARDENDEFVKATV IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEW MAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYP NGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA VEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE >Mature_513_residues SVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDL TRLDVEIKDRAFFANPVLTGAVDKAKNAGKAIHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRS AESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQDEFQADTAVAGLQAAYARDENDEFVKATVI RAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWM AKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPN GDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKAV EGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=99.4163424124514, Blast_Score=1053, Evalue=0.0, Organism=Caenorhabditis elegans, GI32564249, Length=519, Percent_Identity=45.2793834296724, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17507741, Length=519, Percent_Identity=45.2793834296724, Blast_Score=439, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56240; Mature: 56109
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQ CCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCEEEECCCCEECCCCCC MGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAIHIMGLLS CCCCCCCEEECCCCHHHHHHHHHCCEEEECCEEECCCCHHCCHHHHCCCCCEEEEEEEEC AGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGR CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCH VASIIGRYYAMDRDNRWDRVEKAYDLLTLAQDEFQADTAVAGLQAAYARDENDEFVKATV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAA EEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHEEEEEEEEEEHHHHH DIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILI HHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEE NSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEA ECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH LDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCCCCEEEECCCCEEEEEECCCCEEE VEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE ECCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEC >Mature Secondary Structure SVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQ CCCCCCEEEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCEEEECCCCEECCCCCC MGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAIHIMGLLS CCCCCCCEEECCCCHHHHHHHHHCCEEEECCEEECCCCHHCCHHHHCCCCCEEEEEEEEC AGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGR CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCH VASIIGRYYAMDRDNRWDRVEKAYDLLTLAQDEFQADTAVAGLQAAYARDENDEFVKATV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAA EEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHEEEEEEEEEEHHHHH DIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILI HHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEE NSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEA ECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH LDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCCCCEEEECCCCEEEEEECCCCEEE VEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE ECCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA