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The map label for this gene is lldD [H]

Identifier: 218691892

GI number: 218691892

Start: 4217114

End: 4218304

Strand: Direct

Name: lldD [H]

Synonym: ECED1_4291

Alternate gene names: 218691892

Gene position: 4217114-4218304 (Clockwise)

Preceding gene: 218691891

Following gene: 218691893

Centisome position: 80.95

GC content: 55.58

Gene sequence:

>1191_bases
ATGATTATTTCCGCAGCCAGCGATTATCGCGCCGCAGCGCAACGCATTCTGCCGCCGTTCCTGTTCCACTATATGGATGG
GGGGGCATATTCTGAATACACGCTGCGCCGCAACGTGGAAGATTTGTCAGAAGTGGCGCTGCGCCAGCGTATTCTGAAAA
ACATGTCTGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCGCTAGGTCCGGTAGGTTTG
TGTGGCATGTATGCGCGACGCGGCGAAGTTCAGGCTGCCAAAGCGGCGGATGCGCATGGCATTCCGTTTACTCTCTCGAC
GGTTTCCGTTTGCCCGATTGAAGAAGTCGCTCCAGCTATCAAACGTCCGATGTGGTTCCAGCTTTATGTGCTGCGCGATC
GCGGCTTTATGCGTAACGCACTGGAGCGAGCAAAAGCCGCGGGTTGTTCGACACTGGTTTTCACCGTGGATATGCCAACA
CCGGGCGCACGCTACCGTGATGCGCATTCTGGGATGAGCGGCCCGAACGCGGCAATGCGCCGCTATTTGCAGGCGGTGAC
GCATCCGCAATGGGCGTGGGATGTTGGCCTGAACGGTCGTCCGCATGATTTAGGTAATATCTCGGCTTACCTCGGCAAAC
CGACCGGACTGGAAGATTACATCGGCTGGCTGGGGAATAACTTCGATCCGTCCATCTCATGGAAAGACCTTGAGTGGATC
CGCGATTTCTGGGATGGCCCGATGGTGATCAAAGGGATCCTCGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGC
TGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGTGCTGTCTTCTGCCCGTGCGTTGCCTGCTATTG
CAGATGCGGTGAAAGGTGATATCGCCATTCTGGCGGATAGCGGAATACGTAACGGGCTTGATGTCGTGCGTATGATCGCG
CTCGGTGCCGACACCATACTGCTGGGTCGTGCTTTCCTGTATGCACTGGCAACAGCGGGCCAGGCGGGTGTAGCTAATCT
GCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATTAGCGAAATTACGCAAGATT
CGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCGATGGCGAAAGGGAATGCAGCTTAA

Upstream 100 bases:

>100_bases
TTCACACCACCATGAAACGATTCGATGAAGATCAGGCTCGCCATGCACGCATTACCCGCCTGCCTGGTGACCATAATGAG
CATTCGAGGGAGAAAAACGC

Downstream 100 bases:

>100_bases
GGGTTAGACGAATATCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATT
CCGCCAAATACTGGCAACAT

Product: L-lactate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGL
CGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWI
RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIA
LGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAKGNAA

Sequences:

>Translated_396_residues
MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGL
CGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWI
RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIA
LGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAKGNAA
>Mature_396_residues
MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGL
CGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWI
RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIA
LGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAKGNAA

Specific function: Unknown

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FMN hydroxy acid dehydrogenase domain [H]

Homologues:

Organism=Homo sapiens, GI11068137, Length=367, Percent_Identity=33.5149863760218, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI54234014, Length=378, Percent_Identity=34.3915343915344, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI7705393, Length=378, Percent_Identity=34.3915343915344, Blast_Score=213, Evalue=2e-55,
Organism=Escherichia coli, GI1790033, Length=396, Percent_Identity=99.4949494949495, Blast_Score=805, Evalue=0.0,
Organism=Caenorhabditis elegans, GI193208036, Length=371, Percent_Identity=33.9622641509434, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI32566217, Length=285, Percent_Identity=31.9298245614035, Blast_Score=147, Evalue=9e-36,
Organism=Saccharomyces cerevisiae, GI6323587, Length=382, Percent_Identity=28.7958115183246, Blast_Score=163, Evalue=6e-41,
Organism=Drosophila melanogaster, GI78707188, Length=378, Percent_Identity=33.5978835978836, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI281363140, Length=378, Percent_Identity=33.5978835978836, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI78707190, Length=378, Percent_Identity=33.5978835978836, Blast_Score=206, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR012133
- InterPro:   IPR000262
- InterPro:   IPR008259
- InterPro:   IPR020920 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =1.1.2.3 [H]

Molecular weight: Translated: 42729; Mature: 42729

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00557 FMN_HYDROXY_ACID_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSL
CEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCH
ETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAI
HHHHHHHHHCCCEEECCHHHHHHHHHCCCCHHHHCCCCCCCCEEECCEEECCHHHHHHHH
KRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMR
CCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHCCCCCCHHHHH
RYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWI
HHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGD
HHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
IAILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMT
EEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LTGAKSISEITQDSLVQGLGKELPAALAPMAKGNAA
HHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSL
CEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCH
ETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAI
HHHHHHHHHCCCEEECCHHHHHHHHHCCCCHHHHCCCCCCCCEEECCEEECCHHHHHHHH
KRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMR
CCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHCCCCCCHHHHH
RYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWI
HHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGD
HHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
IAILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMT
EEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LTGAKSISEITQDSLVQGLGKELPAALAPMAKGNAA
HHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA