| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yhhT [H]
Identifier: 218691759
GI number: 218691759
Start: 4054155
End: 4055204
Strand: Direct
Name: yhhT [H]
Synonym: ECED1_4147
Alternate gene names: 218691759
Gene position: 4054155-4055204 (Clockwise)
Preceding gene: 218691757
Following gene: 218691760
Centisome position: 77.82
GC content: 51.24
Gene sequence:
>1050_bases ATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGTTGGCCTCGCTGGTAGTGATCCTCGCGGGCAT TCACGCAGCGGCAGATATCATTGTGCAGCTATTACTGGCGCTGTTTTTTGCCATCGTTCTCAACCCGCTCGTCACCTGGT TTATTCGTCGGGGGGTACAACGCCCCGTTGCCATTACGATTGTGGTTGTGGTGATGCTGATCGCACTCACCGCGCTGGTC GGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAGGTTTAATAAGGAGCTGACGCGCAAACTTTTTAA ATTGCAGGAGATGTTGCCTTTTCTTAATTTGCATATGTCGCCGGAGCGAATACTGCAGCGGATGGACTCGGAAAAAGTGG TTACCTTCACCACGGCGCTAATGACCGGGCTTTCCGGGGCAATGGCGAGCGTGCTTTTGCTGGTGATGACCGTAGTTTTT ATGCTGTTTGAAGTGCGCCACGTCCCTTACAAAATGCGTTTCGCGTTGAATAATCCACAGATTCACATCGCCGGACTACA CCGCGCACTTAAAGGCGTTTCGCATTATCTGGCGTTAAAGACGCTACTCAGTTTATGGACAGGCATAATCGTCTGGCTGG GGCTGGAGCTGATGGGGGTGCAGTTTGCGCTGATGTGGGCAGTACTGGCGTTTTTGCTCAACTACGTGCCCAATATCGGT GCGGTAATTTCCGCCGTACCGCCAATGATTCAGGTGCTGCTGTTTAATGGTATTTACGAATGTATTCTGGTCGGCGCATT GTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGG TGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTG TGTAAAATCTGGATGGAAACCACCAAAGGCGGCAGCAAACTGGCGATTTTACTGGGGCCAGGCAGACCGAAAAGTCGGTT ACCGGGATGA
Upstream 100 bases:
>100_bases ATTTTTACCATGTGCTGACGTGAAAATCAGCAGTAAGAATCAGAATATTGCTGGCGTGACTCCCGCTACACTTAATACAA AAAGTCACAAGGAAGCCCCA
Downstream 100 bases:
>100_bases GGCGACAAGTGTTACGATACGCACTTTCATTTTCCATTAAACGTTGGCCCTGATATGTATCGGATAGTTCTGGGGAAAGT TTCGACCTTAAGCGCAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALV GVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVF MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAFLLNYVPNIG AVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSV CKIWMETTKGGSKLAILLGPGRPKSRLPG
Sequences:
>Translated_349_residues METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALV GVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVF MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAFLLNYVPNIG AVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSV CKIWMETTKGGSKLAILLGPGRPKSRLPG >Mature_349_residues METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALV GVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMSPERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVF MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAFLLNYVPNIG AVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSV CKIWMETTKGGSKLAILLGPGRPKSRLPG
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI87082271, Length=349, Percent_Identity=98.8538681948424, Blast_Score=684, Evalue=0.0, Organism=Escherichia coli, GI1787885, Length=339, Percent_Identity=46.0176991150442, Blast_Score=271, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 38561; Mature: 38561
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPVAITIVVVVMLIALTALVGVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCC IHIAGLHRALKGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAFLLNYVPNIG EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPVAITIVVVVMLIALTALVGVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCC IHIAGLHRALKGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAFLLNYVPNIG EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]