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The map label for this gene is dcrB [H]

Identifier: 218691757

GI number: 218691757

Start: 4052245

End: 4052802

Strand: Direct

Name: dcrB [H]

Synonym: ECED1_4145

Alternate gene names: 218691757

Gene position: 4052245-4052802 (Clockwise)

Preceding gene: 218691756

Following gene: 218691759

Centisome position: 77.78

GC content: 51.61

Gene sequence:

>558_bases
ATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGC
TACGGCGCAGGGTTCGGTCGCAGAAAGTAACGCGACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGC
TGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGG
CAGAAAGCAGTCATCGTCATCATGGGCGATGATCCGAAAGAAGATCTGGCGGTGCTGGCGAAGCGTCTGGAAGATCAGCA
ACGTAGCCGCGATCCGCAGCTGCAAGTGGTAACCAATAAAGCCATTGAGCTGAAAGGTCACAAAATGCAGCAGTTAGACA
GCATTATCTCCGCGAAAGGCCAGACGGCGTACTCTTCCGTTATTCTGGGTAACGTGGGTAATCAACTGCTAACCATGCAA
ATTACGCTGCCAGCTGACAATCAGCAAAAAGCACAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAA

Upstream 100 bases:

>100_bases
CGAAATCAACGCTTTGCAGGCGAGTTAAAGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGT
TTATCGAAAGGAAGAAGTCA

Downstream 100 bases:

>100_bases
GTTTTAAGATGATGAGGCGGCCTCAGGTATTTCCACCGGAGGCCGTTTTTTTAATCGCCACGTCAGTAATAACGCGATTG
CGACCAGTCCCGCCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATG
QKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
ITLPADNQQKAQTTAENIINTLVIQ

Sequences:

>Translated_185_residues
MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATG
QKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
ITLPADNQQKAQTTAENIINTLVIQ
>Mature_185_residues
MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATG
QKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
ITLPADNQQKAQTTAENIINTLVIQ

Specific function: Required for phage C1 adsorption [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082269, Length=185, Percent_Identity=99.4594594594595, Blast_Score=371, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014894 [H]

Pfam domain/function: PF08786 DUF1795 [H]

EC number: NA

Molecular weight: Translated: 19787; Mature: 19787

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCC
QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK
CCCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADNQQKAQTTAENIIN
EEEECCCHHHHHHHHHHCCCCHHHHHEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
TLVIQ
HHHCC
>Mature Secondary Structure
MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCC
QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK
CCCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADNQQKAQTTAENIIN
EEEECCCHHHHHHHHHHCCCCHHHHHEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
TLVIQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8752353 [H]