| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yhhQ [H]
Identifier: 218691756
GI number: 218691756
Start: 4051507
End: 4052172
Strand: Direct
Name: yhhQ [H]
Synonym: ECED1_4144
Alternate gene names: 218691756
Gene position: 4051507-4052172 (Clockwise)
Preceding gene: 218691754
Following gene: 218691757
Centisome position: 77.77
GC content: 51.05
Gene sequence:
>666_bases ATGAACGTTTTCTCGCAAACGCAACGCTATAAGGCGTTGTTCTGGTTATCGTTATTTCATCTGCTGGTGATCACCTCCAG TAACTATCTGGTTCAGCTTCCGGTCTCCATTTTTGGTTTTCATACCACCTGGGGCGCGTTTAGCTTTCCGTTTATCTTTC TCGCTACTGACCTGACCGTGCGTATTTTTGGCGCGCCGCTGGCTCGTCGCATCATCTTTGCGGTAATGATCCCCGCATTG CTGATCTCCTACGTCATCTCATCGCTGTTTTATATGGGGTCATGGCAAGGATTCGGCGCGCTCGCCCACTTCAACCTGTT TGTCGCCCGTATCGCCACCGCCAGTTTCATGGCCTACGCGCTGGGGCAGATCCTCGACGTGCACGTTTTTAACCGCCTGC GTCAGAGTCGTCACTGGTGGCTGGCACCGACAGCGTCCACACTGTTCGGTAACGTCAGCGACACGCTGGCCTTCTTCTTC ATTGCCTTCTGGCGTAGCCCGGATGCCTTTATGGCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGT GTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCG AAATCAACGCTTTGCAGGCGAGTTAA
Upstream 100 bases:
>100_bases GCGGCTCGAAAAAAGGGTCAGCACGTTATTATGTTAAGGTAACAGACGTGTCGTACGTATTGGGTTCCCTCACCCCAATG GTTAATCAAAAAGGTACAAT
Downstream 100 bases:
>100_bases AGGTTCGTTATCAGAGTTGTGATAAGATGGATGAATGAGCCGTTATGGCCGTTTATCGAAAGGAAGAAGTCAATGCGCAA TCTGGTTAAATATGTCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPAL LISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRHWWLAPTASTLFGNVSDTLAFFF IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS
Sequences:
>Translated_221_residues MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPAL LISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRHWWLAPTASTLFGNVSDTLAFFF IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS >Mature_221_residues MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPAL LISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRHWWLAPTASTLFGNVSDTLAFFF IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0862 [H]
Homologues:
Organism=Escherichia coli, GI1789882, Length=221, Percent_Identity=99.0950226244344, Blast_Score=439, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003744 [H]
Pfam domain/function: PF02592 DUF165 [H]
EC number: NA
Molecular weight: Translated: 25284; Mature: 25284
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH RIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LGQILDVHVFNRLRQSRHWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL HHHHHHHHHHHHHHHCCCEEECCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHH RIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LGQILDVHVFNRLRQSRHWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL HHHHHHHHHHHHHHHCCCEEECCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]