Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is insA [H]
Identifier: 218691097
GI number: 218691097
Start: 3383130
End: 3383402
Strand: Direct
Name: insA [H]
Synonym: ECED1_3437
Alternate gene names: 218691097
Gene position: 3383130-3383402 (Clockwise)
Preceding gene: 218691091
Following gene: 218691098
Centisome position: 64.94
GC content: 47.99
Gene sequence:
>273_bases ATGGCCAGCGTTAATATTCATTGTCCCCGTTGTCAGTCAGCTCAGGTTTACCGCCATGGTCAGAACCCTAAAGGCCGTGA CAGATTTCGCTGCCGTGACTGCCACCGTGTGTTTCAGCTCACTTATACTTATCAAGCACGTAAGCCGGGTATGAAAGAGA TGATCACTGAAATGGCCTTTAATGGTGCCGGGGTTCGCGATACCGCCAGGACACTGAAAATTGGTATTAACACCATCATC CGGACTTTAAAAAACTCGCACCAACGCAAATAA
Upstream 100 bases:
>100_bases AACCCTTGCTATATGTAATCAAAGTCCTACGAATGTAGGAAAGGGTGATGCCTCTAATTGCTTGAATCTGATGTATAATA CGGGCTTTTGAGGTTATCTC
Downstream 100 bases:
>100_bases CTTCTTCGCCTGTTGCCCATGCTGATGTGGCGCTTATCTGCGAGCTTGATGAGCAATGGAGCTACGTTGGCAGTAAAGCC CGGCTACACTGGCTCTGGTA
Product: transposase InsA (ORF1) IS1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKEMITEMAFNGAGVRDTARTLKIGINTII RTLKNSHQRK
Sequences:
>Translated_90_residues MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKEMITEMAFNGAGVRDTARTLKIGINTII RTLKNSHQRK >Mature_89_residues ASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKEMITEMAFNGAGVRDTARTLKIGINTIIR TLKNSHQRK
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS1 elements insA family [H]
Homologues:
Organism=Escherichia coli, GI1789852, Length=87, Percent_Identity=47.1264367816092, Blast_Score=89, Evalue=5e-20, Organism=Escherichia coli, GI1788204, Length=87, Percent_Identity=47.1264367816092, Blast_Score=89, Evalue=5e-20, Organism=Escherichia coli, GI1786204, Length=87, Percent_Identity=47.1264367816092, Blast_Score=89, Evalue=5e-20, Organism=Escherichia coli, GI87081814, Length=87, Percent_Identity=47.1264367816092, Blast_Score=88, Evalue=1e-19, Organism=Escherichia coli, GI1786471, Length=87, Percent_Identity=47.1264367816092, Blast_Score=88, Evalue=1e-19, Organism=Escherichia coli, GI1786460, Length=87, Percent_Identity=47.1264367816092, Blast_Score=88, Evalue=1e-19, Organism=Escherichia coli, GI1790747, Length=87, Percent_Identity=43.6781609195402, Blast_Score=87, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 10465; Mature: 10334
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKEMITEMAF CCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC NGAGVRDTARTLKIGINTIIRTLKNSHQRK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKEMITEMAF CCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC NGAGVRDTARTLKIGINTIIRTLKNSHQRK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6265806 [H]