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The map label for this gene is ymgA [H]

Identifier: 218689109

GI number: 218689109

Start: 1298373

End: 1298645

Strand: Direct

Name: ymgA [H]

Synonym: ECED1_1305

Alternate gene names: 218689109

Gene position: 1298373-1298645 (Clockwise)

Preceding gene: 218689108

Following gene: 218689110

Centisome position: 24.92

GC content: 36.26

Gene sequence:

>273_bases
ATGAAGACATCTGATAATGAAAGTATAAAATATGAAATTACTGGCCAGGCGGTGCTCCAGATACTGCGCATGAAGATAAA
TTTTTCGTTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAAATACTTTCCGACGAGATTTAATTG
ACAGCATAATTCGTGATTTTAGCAACAGTGATACAGGAGGGCCAAACCGAAGAACAGCGATAGCTGACAATAAAAGTATG
TTCACTGGTAAGAAAATAAACAGAATACATTAA

Upstream 100 bases:

>100_bases
GACAGGGGAAGAGGAACAGAAACATTATAATGCACTAATTGGGTTGCTTTTTGAATAATGCAACAGCCTGATTATTTAAC
AGGTTAGCTATGAAGTCGTT

Downstream 100 bases:

>100_bases
AATTTCATAAGTAAGATGAGAGGTTACCATGCTTGAAGATACTACTATTCATAATGCAATATCTGATAAAGCGTTATCAA
GTTACTTTCGTAGTTCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKTSDNESIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAEENTFRRDLIDSIIRDFSNSDTGGPNRRTAIADNKSM
FTGKKINRIH

Sequences:

>Translated_90_residues
MKTSDNESIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAEENTFRRDLIDSIIRDFSNSDTGGPNRRTAIADNKSM
FTGKKINRIH
>Mature_90_residues
MKTSDNESIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAEENTFRRDLIDSIIRDFSNSDTGGPNRRTAIADNKSM
FTGKKINRIH

Specific function: Probably a connector protein for RcsB/C regulation of biofilm formation, providing additional signal input into the two- component signaling pathway. May serve to stimulate biofilm maturation, probably via the Rcs phosphorelay. Mild overexpression at 16 d

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787412, Length=90, Percent_Identity=93.3333333333333, Blast_Score=172, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10318; Mature: 10318

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSDNESIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAEENTFRRDLIDSIIRDF
CCCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SNSDTGGPNRRTAIADNKSMFTGKKINRIH
CCCCCCCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTSDNESIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAEENTFRRDLIDSIIRDF
CCCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SNSDTGGPNRRTAIADNKSMFTGKKINRIH
CCCCCCCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]