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The map label for this gene is ymgB [H]

Identifier: 218689110

GI number: 218689110

Start: 1298674

End: 1298940

Strand: Direct

Name: ymgB [H]

Synonym: ECED1_1306

Alternate gene names: 218689110

Gene position: 1298674-1298940 (Clockwise)

Preceding gene: 218689109

Following gene: 218689111

Centisome position: 24.93

GC content: 34.46

Gene sequence:

>267_bases
ATGCTTGAAGATACTACTATTCATAATGCAATATCTGATAAAGCGTTATCAAGTTACTTTCGTAGTTCAGGTAATTTGTT
AGAAGAAGAGTCTGCTGTGTTAGGGCAGGCTGTGACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTA
TCTTAAGTCTGATACACTCCCTGGAAACAACAAGTGATATTCTCAAAGCTGATGTGATTAGAAAAACACTGGAAATCGTG
TTGCGATACACAGCTGATGATATGTAA

Upstream 100 bases:

>100_bases
CCAAACCGAAGAACAGCGATAGCTGACAATAAAAGTATGTTCACTGGTAAGAAAATAAACAGAATACATTAAAATTTCAT
AAGTAAGATGAGAGGTTACC

Downstream 100 bases:

>100_bases
CTTTTAATTATAAAGTATAAGTTTATAGAAAACTCATTCATCTTATTTTTGTCTGTCGCTTTAGACTATACACAGCATAA
TTTTATTGGATCACTATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLEDTTIHNAISDKALSSYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIV
LRYTADDM

Sequences:

>Translated_88_residues
MLEDTTIHNAISDKALSSYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIV
LRYTADDM
>Mature_88_residues
MLEDTTIHNAISDKALSSYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIV
LRYTADDM

Specific function: Regulates expression of genes involved in acid- resistance and biofilm formation. May be a non-specific DNA- binding protein that binds genes and/or intergenic regions via a geometric recognition [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AriR family [H]

Homologues:

Organism=Escherichia coli, GI1787413, Length=88, Percent_Identity=97.7272727272727, Blast_Score=171, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9696; Mature: 9696

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDTTIHNAISDKALSSYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LETTSDILKADVIRKTLEIVLRYTADDM
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLEDTTIHNAISDKALSSYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LETTSDILKADVIRKTLEIVLRYTADDM
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA