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The map label for this gene is flgH

Identifier: 218689032

GI number: 218689032

Start: 1221547

End: 1222245

Strand: Direct

Name: flgH

Synonym: ECED1_1223

Alternate gene names: 218689032

Gene position: 1221547-1222245 (Clockwise)

Preceding gene: 218689031

Following gene: 218689033

Centisome position: 23.45

GC content: 52.79

Gene sequence:

>699_bases
ATGCAAAAAAACGCTGCGCATACTTATGCCATTTCCAGCTTGTTGGTGCTTTCACTAACCGGCTGCGCCTGGATACCCTC
CACGCCGCTGGTACAAGGGGCGACCAGTGCACAACCGGTTCCCGGTCCGACGCCCGTCGCCAACGGGTCTATTTTCCAGT
CTGCTCAGCCGATTAACTATGGCTATCAACCGCTGTTTGAAGATCGTCGACCACGCAATATTGGCGATACGCTGACTATC
GTGTTGCAGGAGAACGTCAGCGCCAGCAAAAGCTCCTCTGCGAATGCCAGCCGTGACGGTAAAACTAATTTTGGCTTTGA
TACTGTGCCGCGCTATTTGCAGGGGTTGTTTGGTAACGCTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACG
GAAAAGGCGGGGCCAATGCCAGCAATACCTTTAGCGGTACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAAC
CTGCATGTGGTGGGTGAAAAACAGATCGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACG
CACTATCAGCGGCAGCAATACCGTACCATCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTA
ACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAA

Upstream 100 bases:

>100_bases
GCGGTGTCCACCACCGATCAGATGCTGCAAAAACTGACGCAACTCTAAGGCTTAACCGGTGGCAGGTTCACCGGTTTACT
GATTTTTGAAGATGATAGCC

Downstream 100 bases:

>100_bases
GTGAGGCTGTGGTGATTAAATTTCTCTCTGCATTAATTCTTCTACTGGTTATCACGGCGGCTCAGGCTGAGCGTATTCGC
GATCTCACCAGTGTTCAGGG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTI
VLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM

Sequences:

>Translated_232_residues
MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTI
VLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
>Mature_232_residues
MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTI
VLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=232, Percent_Identity=100, Blast_Score=472, Evalue=1e-134,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_ECO24 (A7ZKI4)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462313.1
- ProteinModelPortal:   A7ZKI4
- STRING:   A7ZKI4
- PRIDE:   A7ZKI4
- EnsemblBacteria:   EBESCT00000021241
- GeneID:   5587566
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1202
- eggNOG:   COG2063
- GeneTree:   EBGT00050000009867
- HOGENOM:   HBG507455
- OMA:   IAGEKQI
- ProtClustDB:   PRK00249
- BioCyc:   ECOL331111:ECE24377A_1202-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 24616; Mature: 24616

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINY
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA
CCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF
CCEEECCCCCEECCCCCCCCCCEECEEEEEEEEEEEECCCEEEEECCEEEECCCCCEEEE
SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
ECCCCCEEECCCCCCCCCHHCCEEEEEECCCCCCCHHCHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINY
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA
CCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF
CCEEECCCCCEECCCCCCCCCCEECEEEEEEEEEEEECCCEEEEECCEEEECCCCCEEEE
SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
ECCCCCEEECCCCCCCCCHHCCEEEEEECCCCCCCHHCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA