Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is flgG [H]
Identifier: 218689031
GI number: 218689031
Start: 1220712
End: 1221494
Strand: Direct
Name: flgG [H]
Synonym: ECED1_1222
Alternate gene names: 218689031
Gene position: 1220712-1221494 (Clockwise)
Preceding gene: 218689030
Following gene: 218689032
Centisome position: 23.43
GC content: 53.38
Gene sequence:
>783_bases ATGATCAGTTCATTATGGATCGCCAAAACGGGCCTTGACGCCCAGCAAACCAATATGGACGTCATTGCCAACAACCTGGC AAACGTTAGTACCAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGG CACAGTCTTCCGAACAAACCACCTTACCATCCGGATTACAAATCGGTACGGGGGTACGCCCGGTCGCCACGGAACGTTTA CACAGCCAGGGCAACCTGTCGCAAACCAATAACAGTAAAGACGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTT GCCAGATGGCTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCCGGTGGTT TTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACC CAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGACTAGAGAGCAT TGGCGAAAACCTCTACACCGAAACGCAATCCTCCGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGC TGTATCAAGGGTATGTTGAAATGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTAC GAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCAAAAACTGACGCAACTCTAA
Upstream 100 bases:
>100_bases TTATCGATTTTGCGAGTTCTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGAAGACATATGCACTTTGTCACT AATCCACTACAGGACATTTT
Downstream 100 bases:
>100_bases GGCTTAACCGGTGGCAGGTTCACCGGTTTACTGATTTTTGAAGATGATAGCCATGCAAAAAAACGCTGCGCATACTTATG CCATTTCCAGCTTGTTGGTG
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERL HSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVEMSNVNVAEELVNMIQVQRAY EINSKAVSTTDQMLQKLTQL
Sequences:
>Translated_260_residues MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERL HSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVEMSNVNVAEELVNMIQVQRAY EINSKAVSTTDQMLQKLTQL >Mature_260_residues MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERL HSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVEMSNVNVAEELVNMIQVQRAY EINSKAVSTTDQMLQKLTQL
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=99.6153846153846, Blast_Score=519, Evalue=1e-149, Organism=Escherichia coli, GI1787317, Length=250, Percent_Identity=32, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787316, Length=138, Percent_Identity=34.7826086956522, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27774; Mature: 27774
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT CCCCEEEEECCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF CCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEECCCCE QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN EECCCCCEEEECCEEECCEEEECCCEEEEEECCCCEEEECCCCCCCCEEECEEEEEEEEC DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVEMSNVNVAEELVNMIQVQRAY CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHH EINSKAVSTTDQMLQKLTQL HCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT CCCCEEEEECCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF CCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEECCCCE QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN EECCCCCEEEECCEEECCEEEECCCEEEEEECCCCEEEECCCCCCCCEEECEEEEEEEEC DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVEMSNVNVAEELVNMIQVQRAY CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHH EINSKAVSTTDQMLQKLTQL HCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]