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The map label for this gene is int [H]

Identifier: 218688893

GI number: 218688893

Start: 1101563

End: 1102897

Strand: Reverse

Name: int [H]

Synonym: ECED1_1084

Alternate gene names: 218688893

Gene position: 1102897-1101563 (Counterclockwise)

Preceding gene: 218688894

Following gene: 218688892

Centisome position: 21.17

GC content: 46.89

Gene sequence:

>1335_bases
GTGCTCTTGGACGCAGGAGGAACAATGGCGAATTCAGCCTATCCAGCCGGCGTTGAAAATCACGGAGGAAAACTCCGAAT
AACGTTTAAGTACAGGGGTAAACGAGTGCGCGAAAATCTTCGCGTGCCCGATACACCGAAAAACAGAAAGATCGCTGGTG
AGTTAAGGGCTTCGGTCTGCTTTGCAATCAGAACAGGAACGTTTGATTATGCCGAGCGATTCCCTGACTCACCTAACCTG
AAGCTATTTGGCCTGGTAAAAAAAGATATCACCGTCGGTGAACTGGCACAGAAATGGCTTACTCTGAAAGCAATGGAAAT
CAGTAGTAACGCCTTAAATCGTTATCAATCAGTGATGAAAAATATGCTACCGAGGCTTGGCGTGGGTAGACTGGCATCCT
CGATTACAAAAGAGGATTTGCTGTTCATCAGGAAAGATTTACTGACTGGGGAAAAGGAAAGCAGGAAAAACACTTCCACC
AACAAAGGAAGAACAGTCCCCACGGTAAACTATTACATGACAACAACTGCCGGGATGTTCAGCTTTGCCGCTGAAAACGG
GTATCTGGAGAAAAACCCGTTTAATTCAATAACACCACTGAGGAAATCAAAACCTGTGCCGGATCCACTGACCAGAGAGG
AGTTTGGTCGCCTCATTGATGCCTGTCATCATCAACAGACCAAAAACCTCTGGACAGTGGCTGTTTTTACGGGGATGCGA
CATGGTGAAATTGCCGCACTTGCATGGGAGGATATCGACCTGAAAGTTGGCACGATAACAGTGCGAAGAAATTTTACAAA
AATAGGTGATTTTACGCTACCAAAGACTGATGCTGGCACCGACCGGGTTATACATCTTCTGGCACCAGCCATTGAAGCAC
TTAAAAACCAGGCGATGCTTACTCGTCTTGGCAGGCAGCATCAGATCACCGTTAAATTACGCGAGTACGGAAGAACAATT
TTGCACGAGTGCACTTTTGTTTTCTGTCCGCAAATCGTTCGCAAGAATCACAAGGCGGGTATTAACTATGCGGTAAGCTC
CATCGGGGCAACATGGGACTCAGCAATGAAAAGAGCGGGTATAAGAGCCCGGAAAGCATATCAGTCACGCCATACTTATG
CGTGCTGGGCTTTATCTGCCGGAGCAAACCCGACATTTATTGCATCACAGATGGGGCACTCCAGCGCCAGCATGGTCTAC
AATGTTTATGGTGCATGGATGCCTGAGTGCAGCGTGACTCAGGTTGCTATGCTGAATAATGTCCTTAATGCCCGTGCCCC
AGACGTGCCCCAAAGTGACCAGGAGGATGAAATAAAATTATATTTTTCAAAATGA

Upstream 100 bases:

>100_bases
GAATGTCTCTATCATCTTCCTACCATCAACACCTGGATTAAAAACCAACCCTTACCATCTCAGGATGTTTAATTCTTGTC
CATAAGAGTATAACCTGAGC

Downstream 100 bases:

>100_bases
TAAAGCATATCCTTAGACATGTTGAAACGATGGCACGCGCAGTTGCTGAGGGTGCAAGCAAAGTGGATGGCGCAGAAGTT
GTCGTTAAGCGTGTACCGGA

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MLLDAGGTMANSAYPAGVENHGGKLRITFKYRGKRVRENLRVPDTPKNRKIAGELRASVCFAIRTGTFDYAERFPDSPNL
KLFGLVKKDITVGELAQKWLTLKAMEISSNALNRYQSVMKNMLPRLGVGRLASSITKEDLLFIRKDLLTGEKESRKNTST
NKGRTVPTVNYYMTTTAGMFSFAAENGYLEKNPFNSITPLRKSKPVPDPLTREEFGRLIDACHHQQTKNLWTVAVFTGMR
HGEIAALAWEDIDLKVGTITVRRNFTKIGDFTLPKTDAGTDRVIHLLAPAIEALKNQAMLTRLGRQHQITVKLREYGRTI
LHECTFVFCPQIVRKNHKAGINYAVSSIGATWDSAMKRAGIRARKAYQSRHTYACWALSAGANPTFIASQMGHSSASMVY
NVYGAWMPECSVTQVAMLNNVLNARAPDVPQSDQEDEIKLYFSK

Sequences:

>Translated_444_residues
MLLDAGGTMANSAYPAGVENHGGKLRITFKYRGKRVRENLRVPDTPKNRKIAGELRASVCFAIRTGTFDYAERFPDSPNL
KLFGLVKKDITVGELAQKWLTLKAMEISSNALNRYQSVMKNMLPRLGVGRLASSITKEDLLFIRKDLLTGEKESRKNTST
NKGRTVPTVNYYMTTTAGMFSFAAENGYLEKNPFNSITPLRKSKPVPDPLTREEFGRLIDACHHQQTKNLWTVAVFTGMR
HGEIAALAWEDIDLKVGTITVRRNFTKIGDFTLPKTDAGTDRVIHLLAPAIEALKNQAMLTRLGRQHQITVKLREYGRTI
LHECTFVFCPQIVRKNHKAGINYAVSSIGATWDSAMKRAGIRARKAYQSRHTYACWALSAGANPTFIASQMGHSSASMVY
NVYGAWMPECSVTQVAMLNNVLNARAPDVPQSDQEDEIKLYFSK
>Mature_444_residues
MLLDAGGTMANSAYPAGVENHGGKLRITFKYRGKRVRENLRVPDTPKNRKIAGELRASVCFAIRTGTFDYAERFPDSPNL
KLFGLVKKDITVGELAQKWLTLKAMEISSNALNRYQSVMKNMLPRLGVGRLASSITKEDLLFIRKDLLTGEKESRKNTST
NKGRTVPTVNYYMTTTAGMFSFAAENGYLEKNPFNSITPLRKSKPVPDPLTREEFGRLIDACHHQQTKNLWTVAVFTGMR
HGEIAALAWEDIDLKVGTITVRRNFTKIGDFTLPKTDAGTDRVIHLLAPAIEALKNQAMLTRLGRQHQITVKLREYGRTI
LHECTFVFCPQIVRKNHKAGINYAVSSIGATWDSAMKRAGIRARKAYQSRHTYACWALSAGANPTFIASQMGHSSASMVY
NVYGAWMPECSVTQVAMLNNVLNARAPDVPQSDQEDEIKLYFSK

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1787607, Length=414, Percent_Identity=43.9613526570048, Blast_Score=336, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR022000
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF12167 DUF3596; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 49646; Mature: 49646

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDAGGTMANSAYPAGVENHGGKLRITFKYRGKRVRENLRVPDTPKNRKIAGELRASVC
CEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCHHHHHHHEEE
FAIRTGTFDYAERFPDSPNLKLFGLVKKDITVGELAQKWLTLKAMEISSNALNRYQSVMK
EEEECCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHH
NMLPRLGVGRLASSITKEDLLFIRKDLLTGEKESRKNTSTNKGRTVPTVNYYMTTTAGMF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEEECCCHHH
SFAAENGYLEKNPFNSITPLRKSKPVPDPLTREEFGRLIDACHHQQTKNLWTVAVFTGMR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCC
HGEIAALAWEDIDLKVGTITVRRNFTKIGDFTLPKTDAGTDRVIHLLAPAIEALKNQAML
CCCEEEEEEECCEEEEEEEEEEECCEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
TRLGRQHQITVKLREYGRTILHECTFVFCPQIVRKNHKAGINYAVSSIGATWDSAMKRAG
HHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHCC
IRARKAYQSRHTYACWALSAGANPTFIASQMGHSSASMVYNVYGAWMPECSVTQVAMLNN
HHHHHHHHCCCCEEEEEEECCCCCCEEEHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
VLNARAPDVPQSDQEDEIKLYFSK
HHHCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MLLDAGGTMANSAYPAGVENHGGKLRITFKYRGKRVRENLRVPDTPKNRKIAGELRASVC
CEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCHHHHHHHEEE
FAIRTGTFDYAERFPDSPNLKLFGLVKKDITVGELAQKWLTLKAMEISSNALNRYQSVMK
EEEECCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHH
NMLPRLGVGRLASSITKEDLLFIRKDLLTGEKESRKNTSTNKGRTVPTVNYYMTTTAGMF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEEECCCHHH
SFAAENGYLEKNPFNSITPLRKSKPVPDPLTREEFGRLIDACHHQQTKNLWTVAVFTGMR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCC
HGEIAALAWEDIDLKVGTITVRRNFTKIGDFTLPKTDAGTDRVIHLLAPAIEALKNQAML
CCCEEEEEEECCEEEEEEEEEEECCEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
TRLGRQHQITVKLREYGRTILHECTFVFCPQIVRKNHKAGINYAVSSIGATWDSAMKRAG
HHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHCC
IRARKAYQSRHTYACWALSAGANPTFIASQMGHSSASMVYNVYGAWMPECSVTQVAMLNN
HHHHHHHHCCCCEEEEEEECCCCCCEEEHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
VLNARAPDVPQSDQEDEIKLYFSK
HHHCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]