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The map label for this gene is ylbF [H]

Identifier: 218688378

GI number: 218688378

Start: 563718

End: 564533

Strand: Direct

Name: ylbF [H]

Synonym: ECED1_0539

Alternate gene names: 218688378

Gene position: 563718-564533 (Clockwise)

Preceding gene: 218688377

Following gene: 218688379

Centisome position: 10.82

GC content: 56.99

Gene sequence:

>816_bases
ATGACGATCATCCATCCTCTACTTGCCAGCCGTAGCGCACCGAATTATCGCCAGTCCTGGCGGTTAGCGGGAGTGTGGCG
GCGGGCGATTAACCTGATGACGGAAAGCGGCGAACTGTTAACGCTGCATCGTCAGGGGAGTGGTTTCGGCCCCGGCGGAT
GGGTGCTTCGCCGCGCGCAATTCGATGCGTTATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCACAAGGG
ATTCGTCTCGGGCGTTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTACGTATTACGCCGCCTGCGCATCCTCAACC
GCTTGCCGTTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCATTGGCGGCAAGCGATCCGCTGC
CTGCTGAATTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGT
AAAGGCCCCGGATTAACGTCAAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGGGCTTTAGA
TGCGCGCTCCGGTCGCCCGTTTTTTGCCTTTTCCGACAATCTTCAACTCGTTACCACTGCGGTGAGCGTCAGTTATTTAC
GTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGTCCGAAACGTACCACAGCG
GCGATCGATTCGCTGCTGGCGCTGGGGCATACGTCAGGGGCCGATACGCTGCTGGGGTTCTGGCTTGGCCAACAATTATT
ACAAGGAAAACCATGA

Upstream 100 bases:

>100_bases
GGGCAGATTGGCGCAGGCACCGTGCGGGCACCGCTGGCGTGCTTTGAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGG
GATTGGTTGAGGAACGCACA

Downstream 100 bases:

>100_bases
AAACACTGGTTGTGGCTCTTGGGGGCAACGCCTTACTCCAGCGCGGTGAGGCGCTGACGGCAGAAAATCAATATCGCAAT
ATTGCCAGTGCTGTGCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQG
IRLGRFTVKQPQRYCLLRITPPAHPQPLAVAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLG
KGPGLTSSHDDTLSGMLLAAWYYGALDARSGRPFFAFSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTTA
AIDSLLALGHTSGADTLLGFWLGQQLLQGKP

Sequences:

>Translated_271_residues
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQG
IRLGRFTVKQPQRYCLLRITPPAHPQPLAVAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLG
KGPGLTSSHDDTLSGMLLAAWYYGALDARSGRPFFAFSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTTA
AIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>Mature_270_residues
TIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGI
RLGRFTVKQPQRYCLLRITPPAHPQPLAVAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGK
GPGLTSSHDDTLSGMLLAAWYYGALDARSGRPFFAFSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTTAA
IDSLLALGHTSGADTLLGFWLGQQLLQGKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786731, Length=271, Percent_Identity=97.7859778597786, Blast_Score=536, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021530 [H]

Pfam domain/function: PF11392 DUF2877 [H]

EC number: NA

Molecular weight: Translated: 29731; Mature: 29599

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQ
CCEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH
FDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAVAWMQRAEETG
HHHHHHHCCCCCCHHHHHHHHHHCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCC
LFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTSSHDDTLSGMLLAA
CCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
WYYGALDARSGRPFFAFSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTTA
HHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHH
AIDSLLALGHTSGADTLLGFWLGQQLLQGKP
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQ
CEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH
FDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAVAWMQRAEETG
HHHHHHHCCCCCCHHHHHHHHHHCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCC
LFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTSSHDDTLSGMLLAA
CCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
WYYGALDARSGRPFFAFSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTTA
HHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHH
AIDSLLALGHTSGADTLLGFWLGQQLLQGKP
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]