Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yaiI [H]
Identifier: 218688250
GI number: 218688250
Start: 426732
End: 427190
Strand: Direct
Name: yaiI [H]
Synonym: ECED1_0410
Alternate gene names: 218688250
Gene position: 426732-427190 (Clockwise)
Preceding gene: 218688248
Following gene: 218688251
Centisome position: 8.19
GC content: 55.56
Gene sequence:
>459_bases ATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGAT GCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTGCGCGTCGCGGCAGGTT TCGACGTTGCCGATAACGAAATTGTTCGGCAGTGTGAAGCGGGCGATTTGGTGATCACCGCAGATATACCTTTGGCTGCT GAAGCCATCGAGAAAGGCGCGGCGGCGCTTAATCCGCGCGGCGAACGTTACACGCCAGCGACCATTCGTGAGCGCCTGAC GATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGAGGACCAGATAGTCTTTCACAACGTGACCGCC AGGCCTTTGCTGCGGAGCTGGAGAAGTGGTGGCTGAAAGTGCAACGTAGTCGTGGCTAA
Upstream 100 bases:
>100_bases AATTTATTGTTTTGATAATCGCTGGCAGAAGCATAAACAGAACTATGCCGGAAGGCAAAAGCGCGACACAATAGAGGATT ACCCAACAAAGGATGACTTT
Downstream 100 bases:
>100_bases ATGTAATTTATTATTTACACTTCATTCTTGAATATTTATTGGTATAGTAAGGGATGTATTGAGATTTCCACCTTAAGTGG AATTTTTTCTTTACAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAA EAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLKVQRSRG
Sequences:
>Translated_152_residues MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAA EAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLKVQRSRG >Mature_151_residues TIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAE AIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLKVQRSRG
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=152, Percent_Identity=99.3421052631579, Blast_Score=306, Evalue=3e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 16969; Mature: 16838
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNE CEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHH IVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGI HHHHCCCCCEEEEECCCHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC QTGGPDSLSQRDRQAFAAELEKWWLKVQRSRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNE EEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHH IVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGI HHHHCCCCCEEEEECCCHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC QTGGPDSLSQRDRQAFAAELEKWWLKVQRSRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA